| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5565 |
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| Symbol | ttuC |
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| ID | 5153695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5791186 |
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| End bp | 5792259 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640560308 |
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| Product | tartrate dehydrogenase/decarboxylase |
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| Protein accession | YP_001241430 |
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| Protein GI | 148256845 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTC ATTCCATCGC CGCCATTCCC GCCGACGGCA TCGGCCCCGA AGTGATCTCG
GCCGGCGTCC GAGTCCTGGA GGCGCTCGCC AAGCGCTCGG GCGACATCAG CTTCAACGTC
AAGACCTTCG ATTGGGGCTC GGACTACTAC AAGAAGAACG GCGTGATGAT GCCGGCCGAC
GGCCTCGCCG AGCTGAAGAA ATTCGACGCG ATCTATTTCG GCGCGGTCGG CGCGCCTGAC
GTGCCCGATC ACATCACGCT GTGGGGCCTG CGGCTGCCGA TCTGCCAGGG CTTCGATCAA
TATGCCAATG TGCGCCCGAC CAAGATCCTG CCCGGCGTTT CTTCGCCGCT GCGCAATGTC
GGCGTCGGCG ATCTCGACTG GGTGATCGTG CGCGAGAACT CCGAAGGCGA ATATGCCGGC
ATGGGCGGAC GTGCGCATCG CGGTCTGCCG GAGGAGGTGG GCACCGAGGT CGCCGTCTTC
ACGCGCATCG GCGTCACCCG CATCATGCGC TTTGCCTTCA AGCTCGCGCA GTCGCGGCCG
CGCAAGTTCC TCACCGTCGT CACCAAGTCG AACGCGCAGC GCCACGGCAT GGTGATGTGG
GACGAGATCG CCGCCGAAGT GGCGCGCGAA TTCCCCGACG TGACCTGGGA CAAGATGCTG
GTCGATGCGA TGACCGTGCG TATGACCCTG CAGCCGAAGA GCCTCGACAC CATCGTTGCG
ACCAACCTGC ACGCCGACAT TTTGTCGGAT CTGGCCGGCG CGCTCGCCGG CAGCCTCGGC
GTGGCGCCGA CCGGCAACAT CGATCCGGAG CGCCGCTTCC CGTCGATGTT CGAGCCGATC
CATGGCTCGG CCTTCGACAT CACCGGCAAG GGCATCGCCA ATCCCGTTGC GACATTCTGG
ACCGGCGCAC AGATGCTCGA ACATCTCGGC GAGAAGGAGG CCGCGACACG GCTGATGGCG
GCGGTCGAGA AAGTGTGTGC GGCCGGCATT CTGACGCCCG ATGTGGGCGG CAAGGCGACC
ACCAAGGAGG TGACCGACGC TGTCATCGAC GCGATTCACG GCTCCAACGT CTGA
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| Protein sequence | MRTHSIAAIP ADGIGPEVIS AGVRVLEALA KRSGDISFNV KTFDWGSDYY KKNGVMMPAD
GLAELKKFDA IYFGAVGAPD VPDHITLWGL RLPICQGFDQ YANVRPTKIL PGVSSPLRNV
GVGDLDWVIV RENSEGEYAG MGGRAHRGLP EEVGTEVAVF TRIGVTRIMR FAFKLAQSRP
RKFLTVVTKS NAQRHGMVMW DEIAAEVARE FPDVTWDKML VDAMTVRMTL QPKSLDTIVA
TNLHADILSD LAGALAGSLG VAPTGNIDPE RRFPSMFEPI HGSAFDITGK GIANPVATFW
TGAQMLEHLG EKEAATRLMA AVEKVCAAGI LTPDVGGKAT TKEVTDAVID AIHGSNV
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