| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5561 |
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| Symbol | |
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| ID | 5153790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5785802 |
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| End bp | 5787532 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560304 |
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| Product | caspase-like domain-containing protein |
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| Protein accession | YP_001241426 |
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| Protein GI | 148256841 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.481458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCTC CGCTGTCCCG CTTTCGCTTG CCGGGTTGGA ACTCCCTGCT CGTCATCGGG
CTGGTGAGCC TGATCGCCTG CTTCGGCCCG AGCTTGGCTC GCGCCGCCAA TGACATCGAC
AGCCTGCAAA CGCCGCCGCG TGCCTTGGCC ACCGCCACGC CGGGGACAGC TGACACCACA
AAGCTGGACA CCGGCCAAGC GGTCGAACCG CGCGTCGCCC TCGTGATCGG CAATGCGAAC
TATCAAAATG CACCGCCACT TGCGAATCCC GACAACGACG CCCATGCGGT CGCCAGGCTG
TTGCACTCGG CCGGCTTCGA GGTCATCACC GCAACCGACC TGACGCAGAG CGAGATGCTG
AAGGTCGTGC AGGATTTTTC AAGCCGCGTC TCCGCGCATG GACCGAACGC GGTGGCCATG
GTGTACTATG CCGGCCACGG CATTCAGCTT GCGGGCGAGA ACTATCTGAT TCCGATCGAT
GCCCGCATCT CCGCGCCCTC CGATCTGACG ACGAGCACGA TCCGACTGGT CGATCTCATG
GCCACGCTCG ATGCCATTCC GAGCCGCATG CGGATCGTGG TGCTCGATGC CTGCCGCAAC
AACCCGTTCC CGACCGTCAG CGATGCCGGG CGCGGACTCG CCATCGTCGA TGCGCCCAAC
GGCTCGATCG TCGGCTACTC CACCTCGCCC GGGGAAGAGG CGCTCGACGG ACGTGGCGAG
CACAGCCCCT ATACGCAGGC CTTCCTGAAT CTGGCACGAC AGCCGAACCT GCCGATCGAG
CAGTTGTTCA AGCGCATTCG TCTGCAAGTG AACCAGGTGA CCGATGGGCG GCAGACGCCG
TGGGAGAGTT CGTCGCTCAC CAGCGATTTC ACATTCTTTG GCGACACGCT GGTCGCCGCG
GCGCGTCCGG CCGACAACGC GCCGGTGGTC CAGATGGCAG CCAACCTGCC TAGCCGGTCC
GTGCGGCAGG CCTACGACTA CGTCCTATCC GAGAACCGCC CGCAATATTA TCGCGAGTTC
ATCGAGATGT ATCCGCGCGA TCCGCTTGCC GACCGCATCC GCGCCCTGCT CACCGGCCTT
GTGCAAGCCG CAGCGTGGCA CCGGACGGTG CTCGCTAATT CACCCGAGGC CTACAAGAGC
TTCAGCGAGA CCTATGCCGA CAGTCCGTAT GCGCCGGTCG CGCTGCGGCT GCAGGCTCAG
CCGCGTCCGA TCCCGGTGCT GCAGCCGAGC CGCCTGATGA TGCCGCCGCA GATGGGGCCG
GTGACGCGTC CCTTCAACCC TGGCGCTCAG ATGCAGGCGC GTCCCGGCCC GTTGCCGCAA
TTGCCGAACA ACAATCCGCC GGCCAATACT CTGCCGCCGC GCCCGACGCT GCCGCCCACC
GTCATCACCA ACGGCAAGCC CATCGCCACC CCCGCCGCCG GCAAGATCGT CGACCCACGG
CCGGTCGGTC CGAGCAAGAT CGGCGACAAG ACCATGCCGA CACCGATCCC TCCTGCGGTT
GCGAAGATCC AGCGCGACCC GCTGAAGCGC GCGCCCGGCC GTCGGTTCGA CAGCCGCGAC
GTCCGGCATC CCTTCCCTGG CAATTCCGGG CCATTCAAGC CGGGCTTCAC CGCGCAACGT
CCCGCGCTGG CACGCGGTCC GATGCGAGGC CCCAGCACGC CGCAGTTCGC ACAGACCGGA
CCGCGTCCAG GTGGTGGAGG ATTGGCGCGG GGTGGCCTCA GCTTCCGCTG A
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| Protein sequence | MSAPLSRFRL PGWNSLLVIG LVSLIACFGP SLARAANDID SLQTPPRALA TATPGTADTT
KLDTGQAVEP RVALVIGNAN YQNAPPLANP DNDAHAVARL LHSAGFEVIT ATDLTQSEML
KVVQDFSSRV SAHGPNAVAM VYYAGHGIQL AGENYLIPID ARISAPSDLT TSTIRLVDLM
ATLDAIPSRM RIVVLDACRN NPFPTVSDAG RGLAIVDAPN GSIVGYSTSP GEEALDGRGE
HSPYTQAFLN LARQPNLPIE QLFKRIRLQV NQVTDGRQTP WESSSLTSDF TFFGDTLVAA
ARPADNAPVV QMAANLPSRS VRQAYDYVLS ENRPQYYREF IEMYPRDPLA DRIRALLTGL
VQAAAWHRTV LANSPEAYKS FSETYADSPY APVALRLQAQ PRPIPVLQPS RLMMPPQMGP
VTRPFNPGAQ MQARPGPLPQ LPNNNPPANT LPPRPTLPPT VITNGKPIAT PAAGKIVDPR
PVGPSKIGDK TMPTPIPPAV AKIQRDPLKR APGRRFDSRD VRHPFPGNSG PFKPGFTAQR
PALARGPMRG PSTPQFAQTG PRPGGGGLAR GGLSFR
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