Gene BBta_5550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5550 
Symbol 
ID5153545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5769902 
End bp5770930 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID640560293 
Productputative thioredoxin reductase, FAD/NAD(P)-binding 
Protein accessionYP_001241415 
Protein GI148256830 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.20394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG CGATCAAGAC CGACGTGCTG ATCATTGGCG CGGGCCCTTG CGGACTGTTT 
GCCGTGTTTG AACTGGGGCT GCTCGACATC AAGGCGCATC TGATCGACAT CCTCGACAAG
GTCGGCGGCC AGTGCGCCGA GCTCTATCCG GAAAAGCCGA TCTATGACAT TCCGGGTGTG
CCGATGGTGA CGGGGCAGGG GCTGACCGAT CAGCTGATGG AGCAGATCAA GCCGTTCAGC
CCGACCTTTC ATCTCGGCGA GATGGTCGAG AAGGTCGAGA AGATCGGCGA TCCCGGCTTT
CGCGTCACCA CCGACGCCGG CAAGGTGTTC GAGTGCAAGG TCGTGGTGAT CGCCGCAGGC
GGCGGCTCGT TTCAGCCGAA GCGGCCGCCG GTGCCGGGCA TCGAGGCTTA TGAAGGCACC
TCGGTGTTCT ACGCCGTGCG CAAGATGGAG CAGTTCCGCG ACAAGAATGT CGTCATCGTC
GGCGGCGGCG ATTCCGCCCT CGACTGGACG CTCAATCTGC ATCCCCTGGC CAAGCGCATC
ACCCTCGTGC ATCGTCGCGA CGATTTCCGC GCGGCGCCTC ACAGCGTCGA GCAGATGCGC
GCGCTCGTCG CAAGCGGCAA GATGGATCTG CGGATCGGCC AGGTCAGTGC GCTCGAAGGT
GCCAACGGCG TGCTCGCCGC CGCTTCCATC AAGGGCAACG ACAATTCGGT CGAGACCGTC
GCCTGCGATA TGATGCTGCC GTTCTTCGGA TTGACGATGA AGCTCGGTCC CGTCGCCGAT
TGGGGCATTG CACTCGAGAA CAATCTCATT CCGGTCGAGA CCTCGGCGTT CGAGACCAGC
GTGCCCGGCA TCTTTGCGAT CGGCGACATC AATACTTATC CGGGCAAGAT CAAGCTGATC
CTGTGTGGAT TCCACGAGGG CGCGTTGATG GCGCAGAAAG CGCACCGCTA CGTGTATCCG
GAGAAGCGGC TGGTGTTCCA GTACACGACG TCGTCGTCGA GCCTGCAGAA GAAGCTCGGC
GTCAACTAA
 
Protein sequence
MSEAIKTDVL IIGAGPCGLF AVFELGLLDI KAHLIDILDK VGGQCAELYP EKPIYDIPGV 
PMVTGQGLTD QLMEQIKPFS PTFHLGEMVE KVEKIGDPGF RVTTDAGKVF ECKVVVIAAG
GGSFQPKRPP VPGIEAYEGT SVFYAVRKME QFRDKNVVIV GGGDSALDWT LNLHPLAKRI
TLVHRRDDFR AAPHSVEQMR ALVASGKMDL RIGQVSALEG ANGVLAAASI KGNDNSVETV
ACDMMLPFFG LTMKLGPVAD WGIALENNLI PVETSAFETS VPGIFAIGDI NTYPGKIKLI
LCGFHEGALM AQKAHRYVYP EKRLVFQYTT SSSSLQKKLG VN