Gene BBta_5549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5549 
Symbol 
ID5153382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5769122 
End bp5769730 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content65% 
IMG OID640560292 
Producthypothetical protein 
Protein accessionYP_001241414 
Protein GI148256829 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.355042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATG CGTTTTCCCG GCTTCGGTTG GCATCTGGCG TGGCGAAGCT CGCGATCGGC 
GCGCTTGTCG TTGCCGGTGC GCTGCTGACG CGGCCTGCGC TCGCAGCGGA GCCGTCCGCG
GCGGGACTGT GGCAGAAGGT CGAGAACGGT CAGCCGGTGC TCTACGTGCT TGTCGTCGAC
CACAACGGGG TCTTCGAAGG CGTGATGGCA AAGCTGTTTC CCAAGCCGAC CGATCCGCCG
AACCGGGTCT GCGACAAGTG CACCGACGAT CGAAAGAATG CGCCCTGGCT CGGTCTGTCC
TTCATCCGCG ACATGAAGCG CGACGGCCTG AAGTACGAAG ACGGCAATGT GCTCGATCCC
CGCGACGGCA AGATCTACAG CGCCAAGATG ACCTTGAGCC CCGACGGCCA GTCGTTGACG
CTGCGCGGCT ATATCGGTTT CTCGCTGCTC GGCAGGGACG AGACCTGGGT GCGCCTGCCT
GATACGGCCA TGGCGCAGAT CGATCCGGCG GTCATCGCCA AATATCTGCC GCCTCCCGCG
GCCCCCGCGA TTCCGGCGGC GAAGCAGGCA GCCCCGCCGA TGATGAAGAA GCCGGCGCCA
GCGAAGTAG
 
Protein sequence
MLNAFSRLRL ASGVAKLAIG ALVVAGALLT RPALAAEPSA AGLWQKVENG QPVLYVLVVD 
HNGVFEGVMA KLFPKPTDPP NRVCDKCTDD RKNAPWLGLS FIRDMKRDGL KYEDGNVLDP
RDGKIYSAKM TLSPDGQSLT LRGYIGFSLL GRDETWVRLP DTAMAQIDPA VIAKYLPPPA
APAIPAAKQA APPMMKKPAP AK