Gene BBta_5541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5541 
Symbol 
ID5153272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5761599 
End bp5762024 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID640560285 
Productputative universal stress protein (Usp) 
Protein accessionYP_001241407 
Protein GI148256822 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.201393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAT CGATTCTGGT TCCCATCGAT CTGGCCGATA CCGACCTTGC CAAGCCCGCG 
ATCGCGACCG CTGCCACCTT GGCGGAGACA TGGGCGGGCA CGGTGCATCT GCTGAACGTC
ATGCCGATGA CGCCGGTGAT GCTGGCCGAA TATGTCCCGG CCGATTTCGA CACGCAGCAG
CGCGAGACCG CCGAGGAAGC GCTGTCGATC GTGGCGCGCG AATCCGGCAT CCCCGCCGAG
CGCGTCAGCT ACGCGGTCCG CCAGGGCGGC ATCTATCACG AGATCCTCGA GGAGGCGGCC
AAGGTCAAGG CCGACCTGAT CGTGATGACC TCGCACCGCC CGGCGATGCG CACCTATTTC
CTCGGCAGCA ACGCGGGGCA CGTGGTGCGC TACGCGAAAT GTTCGGTGCT GGTGGTCAGG
CCGTAG
 
Protein sequence
MFKSILVPID LADTDLAKPA IATAATLAET WAGTVHLLNV MPMTPVMLAE YVPADFDTQQ 
RETAEEALSI VARESGIPAE RVSYAVRQGG IYHEILEEAA KVKADLIVMT SHRPAMRTYF
LGSNAGHVVR YAKCSVLVVR P