| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5538 |
|---|
| Symbol | msrB |
|---|
| ID | 5152688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5758872 |
|---|
| End bp | 5759375 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640560282 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_001241404 |
|---|
| Protein GI | 148256819 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.11463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.138366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC GCCGCCTGAT GCTCACCACC GCTGCCGGAC TGTTCGGTTT CGCCGCCTTG
CGCTGGTTCG GCGGCTCCGC GCCCGCCCGC GCCGCCGAGA AGTTCGAGAT CGAGAAGACC
GAGGCCGAGT GGCGCGCCCA GCTGACCCCG CAGCAATATG AGATCCTGCG CGAGGAGGGC
ACCGAGCGGC CCTGGACCAG CCCGCTGCTC AAGGAGCACC GCAAGGGCAT CTTCGCCTGC
GCCGGCTGCG ACCTGCCGCT GTTCTCCTCG GAGACCAAGT TCGACAGCGG CACCGGCTGG
CCAAGCTTCT TCAAGCCGCT CGACAATGCG GTGGGCACCC GCCAGGACAA GACCTACGGC
ATGGTCCGCA CCGAGGTGCA TTGCCGGCGC TGTGGCGGCC ATCTCGGCCA TGTGTTCGAT
GACGGCCCCA AGCCGACCGG CCTGCGCTAC TGCATGGACG GCCTGTCGCT GGTGTTCCAT
CCGGCCAATC CCTCCTCGAC CTGA
|
|---|
| Protein sequence | MIDRRLMLTT AAGLFGFAAL RWFGGSAPAR AAEKFEIEKT EAEWRAQLTP QQYEILREEG
TERPWTSPLL KEHRKGIFAC AGCDLPLFSS ETKFDSGTGW PSFFKPLDNA VGTRQDKTYG
MVRTEVHCRR CGGHLGHVFD DGPKPTGLRY CMDGLSLVFH PANPSST
|
|---|
| |