| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5536 |
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| Symbol | |
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| ID | 5152791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5754862 |
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| End bp | 5756697 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560280 |
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| Product | putative flagellar hook-associated protein 1 (HAP1, FlgK protein) |
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| Protein accession | YP_001241402 |
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| Protein GI | 148256817 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1256] Flagellar hook-associated protein |
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| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0425173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCC TGCGCTCGAC GCAGGCGGCG CTGTCGATCA TCTCGTCGAA CGTCGCCAAC
GCGAACACGC CTGGCTACGT CGCGCAGAAC CCGAACCAGA TCGAGGTCGC CAGCGGCGGC
TTCGGCTCGA CGGTGATGAC GACCGGCGTC AACCGTCAGC TCGATTTGTT CGTCCAGAAC
CAGCTCCGCA CCGAGACCTC GGGCGGGGCC TATGCCGATC AGATCGCCAA CATCCTGAAG
CAGCTGCAGA GCGTGTATGG CACGCCTGGC GGCAGCGGCA CGTTGGAGAC GTCGCTCAAC
AATTTCACGA CGGCGCTGCA GTCGCTGTCG AACAATCCGA GCAACCAGTC GGCGCAATCG
GTGGCCATGT CCGCCGCGCA AGGCCTGGCG CAGCAGCTCA ATGCGACCAC CAAGGGCATC
CAGACCCTGC GCAGCAATGT CGAGCAGGAC ATCGGTAACT CGGTGACGCA GGCCAATGCG
GCAATCTCCC AGATCGCCAC GCTCAACACC CAGCTGCAGG GCCTCAACAC CTCCGATCCG
CTGTCGGCGA CGCTGCAGGA CCAGCGCGAC AACGCCATCA ATACGCTGTC GAAATATGTC
GACATCCGCG TCGTCTCGGA CGGCAGCAAC GGCGTCAGCG TGTTCACCAA TTCGGGCGTC
CAACTGGTCG GGGCGGGCCT CAGCTCGCAA TTCACCTTCT CCTCGCCGGG CACGCTCGAC
GCCACGTCGC AGTACAACAG CAATCCGACC AAGAGCGGCG TCGGGCAGCT CAACATCAAG
CTTTCAAACG GCGTCTCGCT CGACGTCGTG TCCAACAATC TCCTGAACTC CGGCCAGATC
GCGGCCGATC TCAAGCTGCG CGATCAGACC CTGGTACAGG CGCAGACCCA GGTCGACCAG
CTCGCAGCCA CCATGGCCTC GGCGCTGTCC GACAAGACCA CGGCCGGCAC GGCGGTCGCT
GGTCCTCCGG CCGGCTTCGA CGTCTCGACC ACGGGGCTGC TCGCGGGCAA CACCATCAAT
CTGACCTACA CGGATTCGAG CAACGTTCAG CGTCAGGTCA AGATCGTCAA CGTCAACGAT
CCCGCGGCGC TGCCGCTGCA GAACGCCACC AATGCCAATC CCAGCTATGT CGGCGTCGAT
TTCTCGCTCG GCATGGCCTC GGTGGTGTCG CAGCTGAACA GTGCGCTCGG CAGCGCGCAT
CTGCAGTTCT CGAACCCGTC GGGAACCACG CTGCGCATCA CCGATGACGG CACCAGCCAG
GCGACCGTCA AATCTGCCTC GGCGACCACC ACGGTGCAGA CGCTCGCCAG CGGCAGCGCG
CAGCTGCCGG TGTTTACCGA TGGCGGGGCG CTCTACACCG GCACGATCAC CGCGTCCGGC
TCGCAGATGA CCGGACTGGC CGGGCGGCTC AACGTCAATC CGGCGCTGCT CAACGACCCG
ACCAAGCTGT CGACCTATTC GACCTCGCCG CAGACCGCGG CCGGGGATTC GACGCGGCCC
GATTTCCTGT TCGCGCAGCT GACCTCGGCC ACCTTCACCT ATTCGCCCAA GACCGGCCTC
GGCTCAGCAG CCCAGCCGTT CCAGGGCACG GTGTCCGGCT ATCTGCAGCA GGTCGTCAGC
CAGCAGGGCA GTGCGTCGAC GCTTGCGACC CAGCTCAGCC AGGGGCAGAG CGTGGTCGTC
AGCACGCTGA AGGAGAAGTT CAACTCGACG GCCGGGGTCA ACATGGACAG CGAAATGTCC
AACCTCATCC AGGTCCAGAA CACCTACTCG GCCAACGCCC ATATCATGTC GGTCGTGCAA
AGCATGATGC AGAGCCTGCT CCAGGCCTAT CAGTAA
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| Protein sequence | MSGLRSTQAA LSIISSNVAN ANTPGYVAQN PNQIEVASGG FGSTVMTTGV NRQLDLFVQN
QLRTETSGGA YADQIANILK QLQSVYGTPG GSGTLETSLN NFTTALQSLS NNPSNQSAQS
VAMSAAQGLA QQLNATTKGI QTLRSNVEQD IGNSVTQANA AISQIATLNT QLQGLNTSDP
LSATLQDQRD NAINTLSKYV DIRVVSDGSN GVSVFTNSGV QLVGAGLSSQ FTFSSPGTLD
ATSQYNSNPT KSGVGQLNIK LSNGVSLDVV SNNLLNSGQI AADLKLRDQT LVQAQTQVDQ
LAATMASALS DKTTAGTAVA GPPAGFDVST TGLLAGNTIN LTYTDSSNVQ RQVKIVNVND
PAALPLQNAT NANPSYVGVD FSLGMASVVS QLNSALGSAH LQFSNPSGTT LRITDDGTSQ
ATVKSASATT TVQTLASGSA QLPVFTDGGA LYTGTITASG SQMTGLAGRL NVNPALLNDP
TKLSTYSTSP QTAAGDSTRP DFLFAQLTSA TFTYSPKTGL GSAAQPFQGT VSGYLQQVVS
QQGSASTLAT QLSQGQSVVV STLKEKFNST AGVNMDSEMS NLIQVQNTYS ANAHIMSVVQ
SMMQSLLQAY Q
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