Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5530 |
Symbol | |
ID | 5152288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5745820 |
End bp | 5747370 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560274 |
Product | putative flagellin protein, C-terminus |
Protein accession | YP_001241396 |
Protein GI | 148256811 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.567075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGT CAGGTATCGT TCTCTCGGCG TCGGTGCGCC AGAACCTGCT GTCGCTCCAG TCGACGGCGC AGCTTCTCGC CACCACCCAG AACAATCTCT CCACGGGCAA GAAGGTCAAC TCGGCACTCG ACAATCCGAC CAACTTCTTT ACCGCCCAGG GCCTCGACAA CCGCGCTTCC GACATCTCCA ATCTGCTCGA TGGCATCGGC AATGGCGTGC AGGTTCTGCA GTCTGCCAAC ACCGGCATCA CCTCGCTGCA GAAGCTCGTC GACAGCGCCA AGTCGATCGC CAACCAGGTG CTGCAGAGCG CGGTCGGCTA TTCCACGAAG TCGAACGTGA CCTCAGCTGC GCTGACCGGC GCGACCACCA CCAGCCTGAT TGGCGCCAGC TCGACCGCCG TCACCGGCTC CGTCGTGCTG AACGACAACA CCTCGACCGC GGTGGCGATC ACCGGCTCGA CCAAGCTGTC GGGTACGCCG AGCACCTCGT CGAACGACCT GGCCTCCAGC ATCACCACCG GCGACACGCT GGTCGTGAAC GGCACCACCT TCACCTTTAT CGCCGGCACG TCCTCGTCCG GCACCAATAT CGGCGTCGGT GACAGCGTTA CGAACCTGCT GTCGACCATC CAGAGCGCGA CCGGCGTCAC CTCGTCGATC ACGGCTGGCG CGATCACGCT GACGCCGCCG GCGGCAGGGC TGACATTGTC CGGTACGTCG CTGGCCAAGC TCGGTCTCAG CGCGGTCGGC AATTCGCTGT CCGGGCAGAC GCTGACAATC GCCGCCACAG GAGGTGGCAC GGCGACCAGT GTCACGTTCG GTCTGGGAAC AGGGCAGGTC AACTCGTTGA ACGACCTCAA TGCGAAGCTT GCGGCCAACA ACCTGCAGGC ATCGTTCGAC ACGGCCACCA GCAAGATCAC GATCTCGACC ACGAACGATG CGGCCTCGGC GACGATCGGT GCGATCGGTG GTACGGCGGC GGCGTCCAGC CAGTCCTTCA ACGGTCTGAC GGCGGCGGCT CCGGTGGCTG ATGCGACCGC GCAGTCGCAG CGGTCGAGCC TGGTCGCGCA GTACAACAAC GTGCTGGCGC AGATCAACAC GACCGCAGCT GATGCCTCGT TCAACGGTGT CAACCTGCTC AACGGCGACA CGCTGAAGCT CACCTTCAAC GAGAACGGCA AGTCCACGCT GTCGATCACC GGCGTGACCT TCAACACCGG CGGCCTGGGT CTGTCGACCC TGACCGCAGG CACCGACTTC CTCGACAACA ACTCGGCGAA CAAGGTGATC GGCGTGCTCA ACACGGCGAG CTCCACGCTG CGCAACGAGG CGTCGACCTT GGGTTCGAAC CTGTCGGTGG TGCAGATCCG TCAGGACTTC AACAAGAACC TGATCAACGT GCTGCAGACC GGCTCGTCGA ACCTGACCTT GGCCGACACC AACGAGGAAG CGGCCAACAG CCAGGCGCTG TCGACCCGCC AGTCGATCGC GGTGTCCGCG CTGTCGCTCG CCAACCAGTC GCAGGCAAGC GTGCTGCAGC TGCTGCGCTG A
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Protein sequence | MKMSGIVLSA SVRQNLLSLQ STAQLLATTQ NNLSTGKKVN SALDNPTNFF TAQGLDNRAS DISNLLDGIG NGVQVLQSAN TGITSLQKLV DSAKSIANQV LQSAVGYSTK SNVTSAALTG ATTTSLIGAS STAVTGSVVL NDNTSTAVAI TGSTKLSGTP STSSNDLASS ITTGDTLVVN GTTFTFIAGT SSSGTNIGVG DSVTNLLSTI QSATGVTSSI TAGAITLTPP AAGLTLSGTS LAKLGLSAVG NSLSGQTLTI AATGGGTATS VTFGLGTGQV NSLNDLNAKL AANNLQASFD TATSKITIST TNDAASATIG AIGGTAAASS QSFNGLTAAA PVADATAQSQ RSSLVAQYNN VLAQINTTAA DASFNGVNLL NGDTLKLTFN ENGKSTLSIT GVTFNTGGLG LSTLTAGTDF LDNNSANKVI GVLNTASSTL RNEASTLGSN LSVVQIRQDF NKNLINVLQT GSSNLTLADT NEEAANSQAL STRQSIAVSA LSLANQSQAS VLQLLR
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