Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5528 |
Symbol | |
ID | 5150513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5743312 |
End bp | 5744856 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560272 |
Product | putative flagellin protein, C-terminus |
Protein accession | YP_001241394 |
Protein GI | 148256809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.757214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGGTA TTGTTCTCTC GGCGTCGGTG CGCCAGAATC TGCTCTCGCT CCAGTCGACG GCTCAGCTCC TCGCCACCAC CCAGAACAAC CTCGCCACGG GCAAGAAGGT CAACTCGGCA CTCGATAATC CGACCAACTT CTTCACCGCC CAGGGCCTCG ATAACCGCGC TTCCGACATC TCCAATCTGC TCGATGGCAT CGGCAACGGC GTGCAGGTTC TGCAGGCCGC CAACACCGGC ATCACCTCGC TGCAGAAGCT CGTCGACAGC GCCAAGTCGA TTGCCAACCA GGTGCTGCAG AGCTCGGTCG GCTACTCCAC CAAGTCGAAC GTGACCTCGG CAGCGCTGGC CGGTGCGACC GCCTCGAGCC TGATTGGCGC CAGCACCACC GCCGTCACCG GTTCCGTCGT GCTGAACGAC AACACTTCGA GCGCGGTGGC GATCACCGGC ACGACCAAGC TGTCGGGTAC GCCGGGCACC TCGTCGAACG ACTTGGCCTC CAGCATCACC ACCGGCGACA CGCTGGTTGT GAACGGCACC ACCTTCACCT TTATCGCCGG CACGTCCTCG TCCGGCACCA ATATCGGCGT CGGTGACACC GTTACGAACC TGCTGTCGAC CATCCAGAGC GCGACCGGCG TGACCTCGTC GATCACGGCG GGCGCGATCA CGCTGACGCC GCCGGCGGCA GGCCTGACAT TGTCCGGTAC GTCGCTGGCC AAGCTCGGTC TCAGTGCGGT CGGCAATTCG CTGTCCGGGC AGACGCTGAC AATCGCCGCC ACAGGAGGTG GCACGGCGAC CAGCATCACG TTCGGATTGG GAACGGGACA GGTCAACTCG CTGAACGACC TCAACACGAA GCTTGCGGCC AACAACCTGC AGGCCTCGTT CGACACGTCG TCCGGCAAGA TCTCGATCAC CACGACCAAT GATGCGGCCT CGGCGACGAT CGGTGCGATC GGTGGTACGG CGGCGGCGTC CAGCCAGTCC TTCAACGGTC TTACGGCGGC GGCTCCGGTG GCCGATGCGA CTGCACAGTC GCAGCGGTCG AGCCTGGTCG CGCAGTACAA CAACGTGCTG CAGCAGATCA ACACCACCGC AGCCGACGCC TCGTTCAACG GCGTCAACCT GCTCAACGGC GACACGCTGA AGCTCACCTT CAACGAGACC GGCAAGTCCT CGTTGTCGAT CACCGGTGTG ACCTTCAACA TCGCAGGTCT CGGCCTGTCG AACCTGACTG CGGGCACCGA CTTCCTCGAC AACAACTCGG CGAACAAGGT GCTGAACGTG CTCAACACGG CCAGCTCCAC GCTGCGGTCG GAGGCGTCGA CCCTGGGTTC GAACCTGTCG GTCGTGCAGA TCCGTCAGGA CTTCAACAAG AACCTGATCA ACGTGCTGCA GACCGGCTCG TCGAACCTGA CTCTGGCCGA CACCAACGAG GAAGCGGCCA ATAGCCAGGC GCTGTCGACC CGCCAGTCGA TCGCGGTGTC CGCGCTGTCG CTCGCCAACC AGTCGCAGGC GAGCGTGCTG CAGCTGCTGC GCTGA
|
Protein sequence | MSGIVLSASV RQNLLSLQST AQLLATTQNN LATGKKVNSA LDNPTNFFTA QGLDNRASDI SNLLDGIGNG VQVLQAANTG ITSLQKLVDS AKSIANQVLQ SSVGYSTKSN VTSAALAGAT ASSLIGASTT AVTGSVVLND NTSSAVAITG TTKLSGTPGT SSNDLASSIT TGDTLVVNGT TFTFIAGTSS SGTNIGVGDT VTNLLSTIQS ATGVTSSITA GAITLTPPAA GLTLSGTSLA KLGLSAVGNS LSGQTLTIAA TGGGTATSIT FGLGTGQVNS LNDLNTKLAA NNLQASFDTS SGKISITTTN DAASATIGAI GGTAAASSQS FNGLTAAAPV ADATAQSQRS SLVAQYNNVL QQINTTAADA SFNGVNLLNG DTLKLTFNET GKSSLSITGV TFNIAGLGLS NLTAGTDFLD NNSANKVLNV LNTASSTLRS EASTLGSNLS VVQIRQDFNK NLINVLQTGS SNLTLADTNE EAANSQALST RQSIAVSALS LANQSQASVL QLLR
|
| |