Gene BBta_5527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5527 
Symbol 
ID5150512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5741512 
End bp5743083 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content63% 
IMG OID640560271 
Productputative flagellin protein, C-terminus 
Protein accessionYP_001241393 
Protein GI148256808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGTA TTGTTCTTTC GGCTTCGGTT CGCCAAAACC TGCTGGCCTT GCAAAATACG 
GCATCGCTGC TGGCCACGAC ACAAAACAAC CTGGCCACCG GCAACAAGGT CAACACTGCG
CTCGACAATC CCACCGAATT TTTCACTGCG CAATCACTCA ACAATCGTGC GAGCGACATC
GCGAACCTGC TCGATAGCAT CGGCAACGGT GTGCAGGTTC TGCAAGCCGC GAATACCGGC
CTGACCTCGC TCCAGAAGCT GGTCGACAGC GCCAAGTCGA TCGCGAGCCA GGTCCTCCAG
GCCCCCACGG GCTACACCAC AAAGTCGAGC ATCACGTCAG CTGTCATCCC CGGGGCGACG
GCGAACAACC TGCTCGGCAG CTCGTCGAAC AATTTCGTGA CCGGCAGCAC GGTCAACAAT
GACAATCTGA GCTCCGCCGT CGCGATCACC GGTTCGACGC GACTGTCCGG TACCCCGAGC
TCGACCTCGA ACGACCTGGC CTCCAGCATC ACGACCGGCG ACACCCTCGT GGTCAACGGC
GTGGTGTTCA CCTTCGTCGC CGGGTCCGTG TCGGCCGGCA CCAATATCGG CGTCGGCGAC
ACCGTCAGCA ACCTTCTCGC CGCCATCGAC TCGGTGACCG GCGCGACGGC CACCCCCTCC
AGCGTCACCG GCGGCAAGAT CGCGCTGGCG ACAGGCACGG CGCAGGATCT GACGGTCTCG
GGCACGGCCT TGGCCAAGCT CGGATTGACG GCCGCAACGA CGACACGCAA TGCACCGGCA
TTGTCAGGAC AGACACTGAC AATAGCCTCG ACAGGAGGCG GTGTCGCGAC GAACATCACC
TTCGGCACCG GTGCGTCGCA GATATCGACC CTGGCGCAGC TCAACACCGC GCTTGCCTCG
AACAATCTGC AGGCCAGCCT GAGCACAACC GGTCAGCTCA CGATCCTGAC GACCAACGAG
GCGGCCTCGT CGACGATCGG CGCGGTCGCC GGTTCGTCGA CCGCTTCCAG CATGGCCTTC
AACGGCGTGA CTGCATCGAC CCCGGTGGCC GACACCAACT CGCAGACCAC GCGAGCCGGC
TTGATCGCGC AGTACAACAA CGTGCTCGCG CAGATCAATA CGACCGCGCA GGACGCTTCG
TTCAACGGCA TCAACCTGCT CAACGGCGAT ACGTTGAAAC TGGTCTTCAA CGAGACCGGC
CGCTCGACAC TGAACATCAC CGGCGTGACG TTCAACAGCA CCGGCCTCGG CCTGTCGGCG
CTGGTGGTCG GCACCGACTT CCTCGACAGC AATTCGGCCA ACAAGGTCCT GAGTACCTTG
AACAGCGCTT CGACCGCGAT CCGCTCGGAA GCGTCGTCGC TCGGTTCGAA CCTCTCGATC
GTGCAGATCC GTCAGGACTT CAACAAGAAC CTGATCAACG TGCTGCAGAC TGGCTCGTCG
AATCTGACCT TGGCCGACAC CAACGAGGAA GCGGCCAACA GCCAGGCGCT GTCGACCCGC
CAATCGATCG CGGTGTCCGC GCTGGCGCTG GCCAATCAGT CGCAGGCAAG CGTGCTGCAG
CTGCTGCGCT GA
 
Protein sequence
MSGIVLSASV RQNLLALQNT ASLLATTQNN LATGNKVNTA LDNPTEFFTA QSLNNRASDI 
ANLLDSIGNG VQVLQAANTG LTSLQKLVDS AKSIASQVLQ APTGYTTKSS ITSAVIPGAT
ANNLLGSSSN NFVTGSTVNN DNLSSAVAIT GSTRLSGTPS STSNDLASSI TTGDTLVVNG
VVFTFVAGSV SAGTNIGVGD TVSNLLAAID SVTGATATPS SVTGGKIALA TGTAQDLTVS
GTALAKLGLT AATTTRNAPA LSGQTLTIAS TGGGVATNIT FGTGASQIST LAQLNTALAS
NNLQASLSTT GQLTILTTNE AASSTIGAVA GSSTASSMAF NGVTASTPVA DTNSQTTRAG
LIAQYNNVLA QINTTAQDAS FNGINLLNGD TLKLVFNETG RSTLNITGVT FNSTGLGLSA
LVVGTDFLDS NSANKVLSTL NSASTAIRSE ASSLGSNLSI VQIRQDFNKN LINVLQTGSS
NLTLADTNEE AANSQALSTR QSIAVSALAL ANQSQASVLQ LLR