Gene BBta_5515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5515 
Symbol 
ID5152307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5732897 
End bp5735008 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content67% 
IMG OID640560260 
Producthypothetical protein 
Protein accessionYP_001241382 
Protein GI148256797 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAGC CGGAAATGCC AAGGCGCTTG CTCGGGCGCT TACTCCCGAT GCTGCAGCGT 
TCCTATGGCG GGATGAGCAT CAAGGGACGG CTGCTGTTGC TGGCGGGCAT TCTGTTCCTG
CCCTGCGTCG GCCTGATTGC CTATGTCATC GCCTCGCTGG CGCAGTCGGC GGACGATTCG
ATCCGGCGCG GCCTTTCTTA TGCAGCCCAG ACGATCTCCG GCGCCGTCGA TGCCGAGTTG
CGCCGCTATA TCGCGCTGGC GGAGGTGCTT GCAAAGTCGC CCGAGCTCAG CGCAGCGGAT
CTCACCGACT TCGAGGCGGA GGCGCGCCGC GTCGGTGCCG TCAGCGGGGA CGGCTGGATC
ATCGTTTCGG ATGTGGATGG CCACCTCCTG CTCAACACGG TGTCCGCGCC GGGCAAGCCG
CTCGGAGAGC GCACGCCGGA GGGCCGCCGC TCCCAGGACC GCGCCTTTCG ATCGGGACGG
CCATCGATCT CGGACATCTT CACGGGGCCG AACTCCGGCG CGTGGGTCGC AACCGTCGAT
ATTCCCGTCT TCAAGGACGG CAAGCCGTTC CGTTGCCTGT CGATCGCCAT GCCCGAGTCG
AATTATACCC GGCTGCTGGC CCAGCAGCAG CTGCCGGCCG ATTGGCTGGT CGGCATCATG
GACGAAAGCG GCCGCTACAT CACCCGTATC CCGAAGAACG CCACGAGCAC GGGCCAGCTC
GCATCGGCCG GCTGGCGGGC GCATGCGTCG GTCGACGGCA TCGCGGAGTT TACCTCGATC
GAGGGGGATC GCGTCATCAA TGCCAATGCG CACCCGCAGC TGAGCGGCTG GACGGTCGGA
GTCGGCATCA AGCAGGGCGC GTTCACGCAG GCGATCTCAT CGACCGTCAA GACCGCCACG
ATTGCGGCAA CGACCATTTG CGGGCTCGCG CTGCTGCTCG CGGCCGCGAT CGCCGCCAGC
ATCGCCAGGC CGCTCGGCAG CATCGCGGTC AGGAACTCCA TTCCCGGCGA GGCTGCGGCG
TCCGATCCAC CAGAGGTGCG GGCGCTGAAC GCACGCCTTG CCGCAGCCGA GCGGGCACAG
GCGGAGAGCG CGCGCATCCT TCAGGAGAAC TTCAGGATGC TGGCCAAGGC CAGGGACGAT
GCATCGCGCA GCGCAGAGCA GCTTCGGCTT GCAGCCAAAT ATGGCCGGCT CGGGACGTTC
ATCTGGGACG GCAAGTCCAA CACCAGCCAT TGGTCTGCGG AGATCGAGGA GCTCTACGGT
CTGGCTCCGG GGACCTTCCC CGGCACCTAT GACGACTGGC TGGCGCTCGT GCACCCCGAA
GACCGGGACC GCGCCGACCG GGATAATCGG AAGGCCCTGA TCAGCGGCGA GCTCGATTCG
GAATGGCGGG TGCCGCTGCC GGACGGTTCG GTGCGCTGGA TCGAGGCGCG CGCCCGCATG
CTGTCCGGGG AGGGCAGCAG CGATCTGCAG ATGATCGGCG TCAATATCGA TGTGACCGCA
GCGAAGGAGG CCGACCGGAG GCGCGAGCTG CTGGTTCACG AGCTGGCGCA CCGCGTCAAG
AACAGCCTCG CCGTGGTCCA GTCGCTGGCG CATCAATTGC TGCCGCGCCA GGACGTCAAG
GTCCGCAATT TCATCTCGCG CCTGCATGCG CTGGCCACGG TACACACCAG CCTCGCCGAG
AACGACTGGC AGGGCGCCGA TCTCGCGGCG CTGATCCAAA GCCAGGTCGC GCCCTTCGCC
AGCACGCCCG ATCAGCTCGT GATCCACGGT CCGACCATCC TGGTCCCCGT CGAGCTGACG
ACCCAGCTGG CGCTGGTCGT TCATGAGATG GCCTGCAACG CCAGCAAATA TGGCGCGCTC
TCCACCCCGG ACGGCCACGT CAACGTCAGT TGGTCGCTCG GTGCCGACGT TCTGCACGTC
CGCTGGCAGG AAAGCGGCGG CCCGCCGGCA CGTGAACCGC CGGTGGTCGG CTTCGGCAGC
CGGTTGCTGA CGCGCACCGT CAGACATCTG CAGCGCAGCT TTGGCGAGAC CGGGCTGACC
TGCCAGTTCG ACATGCCCTG GCTGGAAACG CTCGGCCAAG GCCCGGCCGC GGCCGTTGGC
GAGGCGACCT GA
 
Protein sequence
MREPEMPRRL LGRLLPMLQR SYGGMSIKGR LLLLAGILFL PCVGLIAYVI ASLAQSADDS 
IRRGLSYAAQ TISGAVDAEL RRYIALAEVL AKSPELSAAD LTDFEAEARR VGAVSGDGWI
IVSDVDGHLL LNTVSAPGKP LGERTPEGRR SQDRAFRSGR PSISDIFTGP NSGAWVATVD
IPVFKDGKPF RCLSIAMPES NYTRLLAQQQ LPADWLVGIM DESGRYITRI PKNATSTGQL
ASAGWRAHAS VDGIAEFTSI EGDRVINANA HPQLSGWTVG VGIKQGAFTQ AISSTVKTAT
IAATTICGLA LLLAAAIAAS IARPLGSIAV RNSIPGEAAA SDPPEVRALN ARLAAAERAQ
AESARILQEN FRMLAKARDD ASRSAEQLRL AAKYGRLGTF IWDGKSNTSH WSAEIEELYG
LAPGTFPGTY DDWLALVHPE DRDRADRDNR KALISGELDS EWRVPLPDGS VRWIEARARM
LSGEGSSDLQ MIGVNIDVTA AKEADRRREL LVHELAHRVK NSLAVVQSLA HQLLPRQDVK
VRNFISRLHA LATVHTSLAE NDWQGADLAA LIQSQVAPFA STPDQLVIHG PTILVPVELT
TQLALVVHEM ACNASKYGAL STPDGHVNVS WSLGADVLHV RWQESGGPPA REPPVVGFGS
RLLTRTVRHL QRSFGETGLT CQFDMPWLET LGQGPAAAVG EAT