Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5515 |
Symbol | |
ID | 5152307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5732897 |
End bp | 5735008 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560260 |
Product | hypothetical protein |
Protein accession | YP_001241382 |
Protein GI | 148256797 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGC CGGAAATGCC AAGGCGCTTG CTCGGGCGCT TACTCCCGAT GCTGCAGCGT TCCTATGGCG GGATGAGCAT CAAGGGACGG CTGCTGTTGC TGGCGGGCAT TCTGTTCCTG CCCTGCGTCG GCCTGATTGC CTATGTCATC GCCTCGCTGG CGCAGTCGGC GGACGATTCG ATCCGGCGCG GCCTTTCTTA TGCAGCCCAG ACGATCTCCG GCGCCGTCGA TGCCGAGTTG CGCCGCTATA TCGCGCTGGC GGAGGTGCTT GCAAAGTCGC CCGAGCTCAG CGCAGCGGAT CTCACCGACT TCGAGGCGGA GGCGCGCCGC GTCGGTGCCG TCAGCGGGGA CGGCTGGATC ATCGTTTCGG ATGTGGATGG CCACCTCCTG CTCAACACGG TGTCCGCGCC GGGCAAGCCG CTCGGAGAGC GCACGCCGGA GGGCCGCCGC TCCCAGGACC GCGCCTTTCG ATCGGGACGG CCATCGATCT CGGACATCTT CACGGGGCCG AACTCCGGCG CGTGGGTCGC AACCGTCGAT ATTCCCGTCT TCAAGGACGG CAAGCCGTTC CGTTGCCTGT CGATCGCCAT GCCCGAGTCG AATTATACCC GGCTGCTGGC CCAGCAGCAG CTGCCGGCCG ATTGGCTGGT CGGCATCATG GACGAAAGCG GCCGCTACAT CACCCGTATC CCGAAGAACG CCACGAGCAC GGGCCAGCTC GCATCGGCCG GCTGGCGGGC GCATGCGTCG GTCGACGGCA TCGCGGAGTT TACCTCGATC GAGGGGGATC GCGTCATCAA TGCCAATGCG CACCCGCAGC TGAGCGGCTG GACGGTCGGA GTCGGCATCA AGCAGGGCGC GTTCACGCAG GCGATCTCAT CGACCGTCAA GACCGCCACG ATTGCGGCAA CGACCATTTG CGGGCTCGCG CTGCTGCTCG CGGCCGCGAT CGCCGCCAGC ATCGCCAGGC CGCTCGGCAG CATCGCGGTC AGGAACTCCA TTCCCGGCGA GGCTGCGGCG TCCGATCCAC CAGAGGTGCG GGCGCTGAAC GCACGCCTTG CCGCAGCCGA GCGGGCACAG GCGGAGAGCG CGCGCATCCT TCAGGAGAAC TTCAGGATGC TGGCCAAGGC CAGGGACGAT GCATCGCGCA GCGCAGAGCA GCTTCGGCTT GCAGCCAAAT ATGGCCGGCT CGGGACGTTC ATCTGGGACG GCAAGTCCAA CACCAGCCAT TGGTCTGCGG AGATCGAGGA GCTCTACGGT CTGGCTCCGG GGACCTTCCC CGGCACCTAT GACGACTGGC TGGCGCTCGT GCACCCCGAA GACCGGGACC GCGCCGACCG GGATAATCGG AAGGCCCTGA TCAGCGGCGA GCTCGATTCG GAATGGCGGG TGCCGCTGCC GGACGGTTCG GTGCGCTGGA TCGAGGCGCG CGCCCGCATG CTGTCCGGGG AGGGCAGCAG CGATCTGCAG ATGATCGGCG TCAATATCGA TGTGACCGCA GCGAAGGAGG CCGACCGGAG GCGCGAGCTG CTGGTTCACG AGCTGGCGCA CCGCGTCAAG AACAGCCTCG CCGTGGTCCA GTCGCTGGCG CATCAATTGC TGCCGCGCCA GGACGTCAAG GTCCGCAATT TCATCTCGCG CCTGCATGCG CTGGCCACGG TACACACCAG CCTCGCCGAG AACGACTGGC AGGGCGCCGA TCTCGCGGCG CTGATCCAAA GCCAGGTCGC GCCCTTCGCC AGCACGCCCG ATCAGCTCGT GATCCACGGT CCGACCATCC TGGTCCCCGT CGAGCTGACG ACCCAGCTGG CGCTGGTCGT TCATGAGATG GCCTGCAACG CCAGCAAATA TGGCGCGCTC TCCACCCCGG ACGGCCACGT CAACGTCAGT TGGTCGCTCG GTGCCGACGT TCTGCACGTC CGCTGGCAGG AAAGCGGCGG CCCGCCGGCA CGTGAACCGC CGGTGGTCGG CTTCGGCAGC CGGTTGCTGA CGCGCACCGT CAGACATCTG CAGCGCAGCT TTGGCGAGAC CGGGCTGACC TGCCAGTTCG ACATGCCCTG GCTGGAAACG CTCGGCCAAG GCCCGGCCGC GGCCGTTGGC GAGGCGACCT GA
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Protein sequence | MREPEMPRRL LGRLLPMLQR SYGGMSIKGR LLLLAGILFL PCVGLIAYVI ASLAQSADDS IRRGLSYAAQ TISGAVDAEL RRYIALAEVL AKSPELSAAD LTDFEAEARR VGAVSGDGWI IVSDVDGHLL LNTVSAPGKP LGERTPEGRR SQDRAFRSGR PSISDIFTGP NSGAWVATVD IPVFKDGKPF RCLSIAMPES NYTRLLAQQQ LPADWLVGIM DESGRYITRI PKNATSTGQL ASAGWRAHAS VDGIAEFTSI EGDRVINANA HPQLSGWTVG VGIKQGAFTQ AISSTVKTAT IAATTICGLA LLLAAAIAAS IARPLGSIAV RNSIPGEAAA SDPPEVRALN ARLAAAERAQ AESARILQEN FRMLAKARDD ASRSAEQLRL AAKYGRLGTF IWDGKSNTSH WSAEIEELYG LAPGTFPGTY DDWLALVHPE DRDRADRDNR KALISGELDS EWRVPLPDGS VRWIEARARM LSGEGSSDLQ MIGVNIDVTA AKEADRRREL LVHELAHRVK NSLAVVQSLA HQLLPRQDVK VRNFISRLHA LATVHTSLAE NDWQGADLAA LIQSQVAPFA STPDQLVIHG PTILVPVELT TQLALVVHEM ACNASKYGAL STPDGHVNVS WSLGADVLHV RWQESGGPPA REPPVVGFGS RLLTRTVRHL QRSFGETGLT CQFDMPWLET LGQGPAAAVG EAT
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