Gene BBta_5513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5513 
Symbol 
ID5152245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5730826 
End bp5731617 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID640560258 
Productputative hydratase/decarboxylase 
Protein accessionYP_001241380 
Protein GI148256795 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.560438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTG ATGCCGCGGC TGCCGCAGCT GCAATGATCG CCCGCGCCAG GGCCGCATTG 
ACACCGCTCG GAGCCTTGCC GCCTGAGCTT CAGCCTGAAG ATGAAGCCGC AGGCTATGCC
GTGCAGCGCG CTTTGCATGA GCAGGTTGCG GTCCGCCAGG GCGCCCGCGT CGGTTACAAG
ATCGGCTGCA CCAGCAAGGT GATGCAGGAC TATCTGCAGA TCCCGCACCC ATGTGCCGGC
GGCGTGTTTG CCACCGGGGT CCATAGCAGC GGCGTGAGCC TGCCGACGAC CGGCTACGTC
CGGGTCGGTG TCGAATGCGA GATCGCGACG CGGCTCGCGC GGAACCTGCC GCCCGAGGCG
GCGCCGTTCA CGGCGGAGCG CGTTGCGGCC GCCGTCGGCG CCTGTCACCC GGCCATCGAG
GTCGTGGACG ATCGCTACGT CAGATGGGAA ACGTTGGGGG CACCGACCCT GATCGCGGAT
GATTTCTTCG CCGCCGGCTG CGTGCTCGGC GCCGCGGTTG CACACTCCGC TCTGCCGGAT
CTGCTCACCG TGAGGGGACG CGCCATGATC AATGATGAAG TGGCGGGCGA GGGCACCGGA
GCGGATGTGC TGGGCCATCC CTTCCATGCG CTCGCTTGGC TCGCCAACCA TCTTGCCGCG
ACCGGGCAGG GGCTGAAGGC CGGCGAACTG GTGCTGACCG GGAGCCTGGT GAAGACGGTC
TGGCTGAAGG CTGGCGACCG GGTGCGCATG GAGCTGGACG GGCTCGGTGT GGTCGAGGCC
GCCTTCGTGT GA
 
Protein sequence
MEADAAAAAA AMIARARAAL TPLGALPPEL QPEDEAAGYA VQRALHEQVA VRQGARVGYK 
IGCTSKVMQD YLQIPHPCAG GVFATGVHSS GVSLPTTGYV RVGVECEIAT RLARNLPPEA
APFTAERVAA AVGACHPAIE VVDDRYVRWE TLGAPTLIAD DFFAAGCVLG AAVAHSALPD
LLTVRGRAMI NDEVAGEGTG ADVLGHPFHA LAWLANHLAA TGQGLKAGEL VLTGSLVKTV
WLKAGDRVRM ELDGLGVVEA AFV