Gene BBta_5512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5512 
SymbolflgH 
ID5152244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5729693 
End bp5730472 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID640560257 
Productflagellar basal body L-ring protein 
Protein accessionYP_001241379 
Protein GI148256794 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.359845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.839312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGT TCAAGCTTGT TGCGCACAAC TCTTCCGGCT TGCGGCGGGT CGCGCTGGTC 
TCGGTGTCCT TCGCAGTGCT GAGCTTCGCC GGCGGCTGCT CCTCGATCGA CCGCATCTCG
CAGATCGGCG AGCGGCCGAA GCTGACCGAG ATCGACAATC CGACGACACA GCCGGGCTAC
AAGCCGGTGC AGATGCCGAT GCCGAAGCCG GAGGTGGTGT CCTACGCGCC GAACTCGCTG
TGGCGCAACG GCTCGCGGGC CTTCTTCAAG GACCAGCGCG CCCGCCAGGT CGGCGACCTC
CTGACGGTCA CGGTGAGCAT CTCCGACAAG GCCAACATCG CCAACGAAAC GCAGCGCAGC
CGCACCAACA AAGAAGACTC GGGGATCACC GATTTCGTCG GCTCGAAGAC GCTCGGCGCC
ACCGGCAAGA ACATTCTGCC CGGCCGCATC CTGACCGCCG ACGGCACCTC GTCCTCCGAC
GGCAAGGGCA CCATCCAGCG CTCGGAATCG CTGACCACCA GCGTCGCCGC AGTCGTGACC
CAGGTGCTGC CGAACGGCAA TCTGGTCGTC GAAGGCAAGC AGGAGATCCG GGTCAATTAC
GAGATCCGCG AGCTGATCGT GGCCGGCATC GTGCGCCCGG AAGACATCCA GAGCGACAAC
ACGATCGACT CCACCAAGAT TGCCCAGGCG CGCATCTCCT ATGGCGGCCG CGGCCAGATA
ACGGACGTGC AGCAGCCGCG CTACGGCCAG CAGGTGATGG ACATCCTGCT GCCGTTCTGA
 
Protein sequence
MSMFKLVAHN SSGLRRVALV SVSFAVLSFA GGCSSIDRIS QIGERPKLTE IDNPTTQPGY 
KPVQMPMPKP EVVSYAPNSL WRNGSRAFFK DQRARQVGDL LTVTVSISDK ANIANETQRS
RTNKEDSGIT DFVGSKTLGA TGKNILPGRI LTADGTSSSD GKGTIQRSES LTTSVAAVVT
QVLPNGNLVV EGKQEIRVNY EIRELIVAGI VRPEDIQSDN TIDSTKIAQA RISYGGRGQI
TDVQQPRYGQ QVMDILLPF