| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5484 |
|---|
| Symbol | |
|---|
| ID | 5151738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5701064 |
|---|
| End bp | 5703289 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640560231 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241353 |
|---|
| Protein GI | 148256768 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTC CCCCCGTCAA GCTTCATTAC GTGCCCGCGA TCGCCGCCGA AGCGGCCAAG
CGGTTCAAGT CGCGCAACGA GCCGCGCCGC AGGCGGATGA CCGCTGCCAA CAAGGGCGAA
TACACCAAGG TCGAATCCAA GGAGCGGCTG GTCAATCACG TTAACAGGCT GCTGAGCGAG
CTGGCGAGTT CGACCGCCGC GCCGGATCCG GCGAGCGCGC AGGAGACGTT GCGGCGCGAG
GCCCCAACGT TGAAGGGCCT GCCGTCACCG GGCCAGGTCA CGGCGAGCGA CATCAACGAT
CGTTTTGTGG AGCGCGTGAT CGGCAAGACG CGCGACTTCC TCGCGGTGCA GTTCTTCGAT
CGCGGTGCAC GGGCGAGCCG CGCGGTGTGC CGGATAGTCA CGACCTTTCC TGAGGGCGAA
GCCTTCGGCA CCGGTTTCCT GGTCACGCCG CGGCTGCTGA TCACCAATCA TCACGTGTTC
ACCGATGATG ACGTGGCGCG GCGCAGCAGG GCCGAATTCA ACTATCAGCT CGGGGGCGAC
GAGACGCTCG CGGTCGAGAC CTTCGCCTTC ACGCCCGACG TGTTCTTTCT CAATGACAAG
GGGCTCGATT TCGCGCTGGT CGCGGTGGCC CCGAGCTCGG CCAAGGGGAC GCCGCTCGAT
CATTTCGGCT TCTGTCCGCT GATCGGCGCC GAAGGCAAGA TCATCACCGG CCAGCCGGTC
AACATCGTGC AGCATCCGAG CGGCGGGTTG AAACAGGTCG TCGTGCGCGA TAACCAGCTG
ATCGACCTGC CGGAGAACGG CTCGGCGGTG GATCAATACG CCTATTACGA AGCCGACACC
GAGCCGGGCT CGTCGGGCTC GCCGGTCTTC AACGATCAGT GGGAGGTCAT CGCCCTGCAT
CATTCGGGCG TGCCCAAGAC CAACCGCAGC GGTCAGGCGC TCGACGCCAG CAACAAGGTG
GTGCCGTCCG ACGGCGACCA GACTCGCGTC GAATGGATCG CCAATGAAGG CATCCGCACC
TCCCGTCTGG TCAAGTTCAT CGCCAATGCT GGCGTGGCGC GCGGCAAGGA GCTCAAGGAC
GAGTTCGTCA ATATCAGCGC CGGGCAGGTG GTTCGGCCGC CTCCCAACCC GCCGGTGGAG
AGCACGCCAG TGACGCCCGA GCCTCCGCCA TCGCCGCCGC CTCCCGCGCC TGAGCCCGTG
GCGGCGTCGC CAGCCGGCAC GGTCTCGATC ACGGTGCCGC TGAACATCAC GATCAGCCTT
GGCGCGGCGG CTGGCGCCAC CATCGCCGCG CCGGCGGGAG TGCTCACGGC GCCGGCCGGC
TCGGATCTGC TGGAGCAGGC GCGGCCCGAG CCGTTCTCGA CGCCGCGCCC GGGGTTCGAT
GCGAAGTTTC TCGGCTTCGA TGCGCCATTG CCCAGGCTTG CGCCGCCCGC AGCGGCGGCG
GCGGCGAAGC TCGCCAATGG CGGCATCGAG CTGACCTACT TCCACTACAG CGTCATCATG
AATGCCCAGC GCAGGCTCGC CTTTGTCTCC GCGGTCAATC TCGACACAAA GGCGAAATTC
CAGGTCAAGC GCGACGGCAA GGACAAATGG TACTATGACA GCCGCATCCC GCGCGAGGCG
CAAGCGGGCC CCGAGCTCTA CGCCGACAAC CCGCTCGACT TCGGCCATTT GACGCGCCGC
CAGGACGCGG CCTGGGGCGC CGACGAGGAC GAAGCCAACG CCGCCAACAG CGACACCTTC
CATCTGACCA ACTGCTCGCC GCAGCATTCG GTGTTCAACC AGAGCAGCCT CGCCAGCCAC
AATGGCGTGC TGCTGTGGGG CAACCTCGAA ATGTATGTGA CGGCGCAGGC GAAGAAGGAC
ACGCCGCGGC TGTCGATCTT CAACGGCCCG GTGTTCCGCG CTACCGACCA GCTCTATCGC
GGCATCCTGT TGCCGCGCGA GTTCTGGAAG CTGATCGTGT TCACGCGCGC CGATGGCCGG
CCCGGCGCGG TCGCCTTCGT GCTGAGCCAG GAGAGCCTGA TCCGCAATCT GCCGGCCGAG
GAATTCGTGG TCGGGCCCTA CCGTCCGTTC CAGCTCCGTA TCGCCGATCT CGCCGCGCGC
ACCCAGCTCG ATTTCGGCAA AATTCAGAGC TACGACCGCA TGGGCGATGT CCGCCAGGAG
AGCCTGATGG AGGGCGCGCG CAGTCCGGTG GTGTCGATCG GCAGCTTCGC CGACGTGGTG
ATCTGA
|
|---|
| Protein sequence | MAAPPVKLHY VPAIAAEAAK RFKSRNEPRR RRMTAANKGE YTKVESKERL VNHVNRLLSE
LASSTAAPDP ASAQETLRRE APTLKGLPSP GQVTASDIND RFVERVIGKT RDFLAVQFFD
RGARASRAVC RIVTTFPEGE AFGTGFLVTP RLLITNHHVF TDDDVARRSR AEFNYQLGGD
ETLAVETFAF TPDVFFLNDK GLDFALVAVA PSSAKGTPLD HFGFCPLIGA EGKIITGQPV
NIVQHPSGGL KQVVVRDNQL IDLPENGSAV DQYAYYEADT EPGSSGSPVF NDQWEVIALH
HSGVPKTNRS GQALDASNKV VPSDGDQTRV EWIANEGIRT SRLVKFIANA GVARGKELKD
EFVNISAGQV VRPPPNPPVE STPVTPEPPP SPPPPAPEPV AASPAGTVSI TVPLNITISL
GAAAGATIAA PAGVLTAPAG SDLLEQARPE PFSTPRPGFD AKFLGFDAPL PRLAPPAAAA
AAKLANGGIE LTYFHYSVIM NAQRRLAFVS AVNLDTKAKF QVKRDGKDKW YYDSRIPREA
QAGPELYADN PLDFGHLTRR QDAAWGADED EANAANSDTF HLTNCSPQHS VFNQSSLASH
NGVLLWGNLE MYVTAQAKKD TPRLSIFNGP VFRATDQLYR GILLPREFWK LIVFTRADGR
PGAVAFVLSQ ESLIRNLPAE EFVVGPYRPF QLRIADLAAR TQLDFGKIQS YDRMGDVRQE
SLMEGARSPV VSIGSFADVV I
|
|---|
| |