| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5433 |
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| Symbol | ilvD |
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| ID | 5150515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5652780 |
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| End bp | 5654621 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560185 |
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| Product | dihydroxyacid dehydratase |
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| Protein accession | YP_001241309 |
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| Protein GI | 148256724 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.535881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.212385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT ATCGCTCCCG CACCTCCACC CATGGCCGCA ACATGGCCGG CGCCCGCGGC
CTGTGGCGCG CCACCGGCAT GACCAATGAG GATTTCGGCA AGCCGATCAT CGCCGTCGTC
AACTCCTTCA CCCAGTTCGT GCCCGGCCAT GTGCATCTCA AGGATCTCGG CCAGCTGGTC
GCCCGCGAGA TCGAGAAGGC CGGCGGCGTC GCCAAGGAGT TCAACACCAT CGCGGTCGAT
GACGGCATCG CGATGGGCCA TGACGGCATG CTCTACAGCC TGCCCTCGCG CGAGCTGATC
GCCGACAGCA CGGAATACAT GGTCAACGCG CATTGCGCTG ACGCCATGGT CTGCATCTCC
AATTGCGACA AGATCACGCC GGGCATGCTG ATGGCCGCGA TGCGGCTGAA CATTCCTGCG
GTGTTCGTCT CGGGCGGTCC GATGGAGGCC GGCAAGGTCA ACATCCAGGG CAAGCTGCGC
AAGGTCGACC TGATCGACGC GATGATTGTG GCCGCCGACG ACAAGGTGTC GGATGCGGAT
GTCGAGGTGA TGGAACGTTC GGCCTGCCCG ACCTGCGGCT CCTGCTCGGG CATGTTCACC
GCCAACTCGA TGAACTGCCT GACCGAGGCG CTCGGCCTGT CGCTGCCCGG CAACGGCTCG
GTGCTGGCGA CGCATGCCGA CCGCCGCGGC CTGTTCGTCG AGGCCGGGCA TCTGATCGTG
GACCTCGCCC GCCGCTATTA CGAGCAGGAC GATGCCAGCG TGCTGCCGCG CAACATCGCC
AACTTCAAGG CGTTCGAGAA CGCGATGAGC ATGGACATCG CGATGGGCGG CTCGACCAAC
ACGGTGCTGC ATCTGCTCGC CGCCGCGCAT GAGGGCGAGG TCCCCTTCAC GATGACCGAC
ATCGATCGCC TCTCGCGCAA GGTCCCCTGC CTGTGCAAGG TCGCGCCCGC TGTCGCCGAC
GTGCACATGG AGGACGTGCA TCGCGCCGGC GGCGTGATGG GCATCCTCGG CGAGCTCGCC
CGCGCCGGCC TGCTGCACAC CGAATTGCCG AGCGTGCATT CGGCCTCGCT GGAGGCTGCG
CTGGAGCGCT GGGACATCCG CCGCACGGCG AGCGACAGCG TCAGGAATTT CTACATGGCC
GCCCCCGGCG GCGTGCCCAC GCAAGTCGCC TTCAGCCAGG ACCGCCGTTA CCAGGAGCTC
GATCTCGACC GCGAGAAAGG CTGCATCCGC GACATCGACC ATGCCTATTC GAAGGACGGC
GGCCTTGCAG TGCTGACCGG CAACATCGCG CGCGACGGCT GCATCGTGAA GACCGCCGGC
GTCGATGCCT CGATCCTGAA ATTCGCAGGT CCGGCGCGCG TCATGGAGAG CCAGGACGCC
GCGGTGGAAG CGATCCTCAC CAACAAGATC AAGGAAGGCG ACGTCGTCGT CATCATCTAT
GAAGGCCCGC GCGGCGGCCC CGGCATGCAG GAGATGCTGT ATCCGACCAG CTATCTGAAG
TCGAAGGGCC TGGGCAAGGC CTGCGCGCTG ATCACCGATG GCCGCTTCTC CGGCGGCACC
TCGGGCCTGT CGATCGGCCA CGTCTCGCCG GAAGCCGCCG AAGGCGGCCT GATCGGGCTG
GTGCAGGACG GCGACCGCAT CGAGATCGAC ATTCCCAACC GCACCATCCA TCTCGCGGTG
TCGGATGAGG AGCTGGCCAG GCGTCGCGCC GCGATGGAGG CCAAAGGCGA CCAGGCCTGG
AAGCCGAAGA CGCGCGCCCG CAAGGTCTCG ACCGCGCTCA AGGCCTATGC GGCCTTCGCC
TCCAGCGCCG CCAAGGGCGC CGTGCGCATC GTCAAGGACT GA
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| Protein sequence | MPAYRSRTST HGRNMAGARG LWRATGMTNE DFGKPIIAVV NSFTQFVPGH VHLKDLGQLV
AREIEKAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRELI ADSTEYMVNA HCADAMVCIS
NCDKITPGML MAAMRLNIPA VFVSGGPMEA GKVNIQGKLR KVDLIDAMIV AADDKVSDAD
VEVMERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS VLATHADRRG LFVEAGHLIV
DLARRYYEQD DASVLPRNIA NFKAFENAMS MDIAMGGSTN TVLHLLAAAH EGEVPFTMTD
IDRLSRKVPC LCKVAPAVAD VHMEDVHRAG GVMGILGELA RAGLLHTELP SVHSASLEAA
LERWDIRRTA SDSVRNFYMA APGGVPTQVA FSQDRRYQEL DLDREKGCIR DIDHAYSKDG
GLAVLTGNIA RDGCIVKTAG VDASILKFAG PARVMESQDA AVEAILTNKI KEGDVVVIIY
EGPRGGPGMQ EMLYPTSYLK SKGLGKACAL ITDGRFSGGT SGLSIGHVSP EAAEGGLIGL
VQDGDRIEID IPNRTIHLAV SDEELARRRA AMEAKGDQAW KPKTRARKVS TALKAYAAFA
SSAAKGAVRI VKD
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