Gene BBta_5415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5415 
Symbol 
ID5149457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5633791 
End bp5635176 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content63% 
IMG OID640560169 
Productputative nitrate ABC transporter (substrate-binding protein) (ntrA-like protein) 
Protein accessionYP_001241293 
Protein GI148256708 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.411292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTT TCGATGATCC GTTCGATGCC GATTCACGCG TGAATGCCGG TTGTATTTGC 
GGCCAGCATC GCAGTCCGGC CGAACATGAG CACGCCCTGC GCGCGTTGCG CTGTGAGCCG
GTGGTGGAGT CCGCGGAGAA GCGCTACGAG AACGTCGTCG CCTCGGCGGT GCTGCGCGCC
GTCTTTCCGC AAGCCGCCAC GCGCCGCGCG TTCCTGAAAT CGGTCGGCGC GGCCACCGCG
CTGGCCGCGG TGTCGCAATT CTTCCCGCTG AAGACCGCGA CCGAAGCCTT CGCCGAAGCG
GGGGCACCTG AGAAGAAGGA TCTCAAGGTC GGTTTCATCC CGATCACCTG CGCCACGCCG
ATCATCATGG CGGCGCCGCT CGGCTTCTAT GCGAAGGCTG GCCTGAATGT GGAGGTGGTG
AAGACCGCGG GCTGGGCCGT CATCCGCGAC AAGACCATCA ACAAGGAATA CGACGCCTCG
CATATGCTGG CGCCGATGCC GATCGCGATC TCGCTGGGGC TCGGCGCGCA GCCGATCCCC
TTCACCGTGC CCGCGATCGA GAACATCAAC GGGCAGGGCA TCGTGCTGTC GATGAAGCAC
AAGGACAAGC GCGATCCGAA GGATTGGAAG GGTCTCAAAT TCGCGATTCC CTTCGACTAT
TCGATGCACA ATTATCTTCT GCGCTATTAT CTCGCCGAGC ACGGCATCGA TCCCGATACC
GACGTGCAGC TGCGTTCGGT GCCGCCGCCG GAGATGGTCG CCAACCTCAG GGCCGACAAC
ATCGACGGCT TCCTTGCGCC CGACAACATC TGCCAGCGCG CGATCTATGA CGGCGTCGGC
TTCCTGCATA TTCTGTCCAA GGAGATCTGG GACGGCCATC CCTGCTGCAG CTTCGCCGCC
AGCCGCGAGT TCATTACATC CGCGCCGAAC AGCTTCGCCG CGCTGACCCG CGCCATCGTC
GATGCCACGG CCTACGCGTC GAAGGCGGAT AACCGGAAGC AGATTGCGGA GGCGATCGCG
CCGGCCAACT ACATCAACGC GCCGGTGACG GTGCTGGAGC AGGTGTTGAC CGGCACCTAT
GCCGACGGCC TTGGTGGCGT GAAGACCGAC CCGAAACGAG TCGATTTCGA TCCGTTCCCG
TGGCAGTCCT TTGCGGTGTG GATGCTGACC CAGATGAAGC GCTGGGGCCA GATCAAGGGC
GATGTCGACT ACAAGGCGGT CGCCGAGCAG ATCTATCTGG CCACCGACAC CCGCAAGGTC
ATGACCGAGA TGGGCCTGAC GCCGCCGAAG GACTCCTACA AATCGTTCTC GGTGATGGGC
AAGCCGTTCG ATCCGACCAA GCCAGATGAT TACGTCGCCA GCTTCAAGAT CAAGAAGGCC
TCGTGA
 
Protein sequence
MSIFDDPFDA DSRVNAGCIC GQHRSPAEHE HALRALRCEP VVESAEKRYE NVVASAVLRA 
VFPQAATRRA FLKSVGAATA LAAVSQFFPL KTATEAFAEA GAPEKKDLKV GFIPITCATP
IIMAAPLGFY AKAGLNVEVV KTAGWAVIRD KTINKEYDAS HMLAPMPIAI SLGLGAQPIP
FTVPAIENIN GQGIVLSMKH KDKRDPKDWK GLKFAIPFDY SMHNYLLRYY LAEHGIDPDT
DVQLRSVPPP EMVANLRADN IDGFLAPDNI CQRAIYDGVG FLHILSKEIW DGHPCCSFAA
SREFITSAPN SFAALTRAIV DATAYASKAD NRKQIAEAIA PANYINAPVT VLEQVLTGTY
ADGLGGVKTD PKRVDFDPFP WQSFAVWMLT QMKRWGQIKG DVDYKAVAEQ IYLATDTRKV
MTEMGLTPPK DSYKSFSVMG KPFDPTKPDD YVASFKIKKA S