Gene BBta_5400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5400 
Symbol 
ID5150047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5621408 
End bp5622604 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content62% 
IMG OID640560156 
Producthypothetical protein 
Protein accessionYP_001241280 
Protein GI148256695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATAT CGGTTACGCA ATCGGCGGCG GCCGCGAAGG TCGAGCTTCA GGCCAGGCCT 
CGGGCCCGGG CGCGCAATGC AGCGCTCGAC CATGCAAGAA CATTCCTGAC GCTGGTGGTG
TTGCTGCATC ACGCCGTGAT TCCCTATACC TATTTCGGCC ACACCGATCC GACCTCGTTC
ATCGGCTTCG ATGGCATCGT GCTGGCCACC GACAGCTTCT TCATGGCGAT GTTCTTCTTC
CTGTCGGGCC TGTTCGTGTG GTCCGGCCTT GCCCACAAAT CGACCTTGCA GCACTTGCGC
GACCGGCTGC TGCGGCTTGG TCTGCCCTTC GTGATCGCTG CCCTGACCGT TATTCCGCTG
GCTTATTATG CGATCGAATT GCGCGCCAAT CCCGAGGCGA CCTTCGCCGC ATTCTGGTGG
AAGACCGTCA CCGTCGGCCC CTGGCCGAGC GGGCCGATCT GGTTCATCTG GGTGCTCCTG
GCGTTCGATC TTGCGGCCGC GCTGCTCTAC CGCGTCTCGC CGCACCTGCT CGATCCGATC
AACCGGCTGT CGCTGCGCGC CTTCGCTCAT CCGCGCGATT TCTTCTTCAT CTTCCTGCTG
ATCACCGGCG TGCTCTACAT CCCGGCGCGG CTGTATTTTG GACCGACGCA TTGGTTCGAA
CTTGGTCCGC TCTCGGTCCA GGCCAGCCGC GTGCTGCTCT ACGCCGCCTA CTTCTTCGTC
GGCGCCGGGA TCGGCTCGGC CAATTTCGAG CGCGGCCTGC TGGCTGCCGA AGGGCAGATG
TCGCAGCGTG GGCTCGGCGC ATGGATCGTG GTCACGATCG TGCCTTACGC GCTGCTCTGG
GTGCTGATCA CGATCAAGCG TCAGGTGCTC GGCAATCCGC CCGAGCTGCC GCATTGGTAC
GAGGCGGCAT ATGGCTTCTT CTTCGTGATC TTCAGCGCCG CGATGATGTT CGCGATCCTG
TCCTACTTCC TCAACAACCG CCGTTCGGAA TTCTCCGTGC TCGACCGGCT GCAGGCCGAC
GCCTATGGCA TGTTCCTGGT GCACTATCCG ATCGTGCTGT GGATCCAATA TTGGTTGTTC
GACCTCAGCC TGCCGGCCAT CGTCAAGGCC ACGATCGCCT TTGTCGGCAG CGTGTTGTTG
AGCTGGGGCG CGACCTGGGT GTTACGGCAA ATTCCGGGCG CGAAGAACGT GTTGTAG
 
Protein sequence
MVISVTQSAA AAKVELQARP RARARNAALD HARTFLTLVV LLHHAVIPYT YFGHTDPTSF 
IGFDGIVLAT DSFFMAMFFF LSGLFVWSGL AHKSTLQHLR DRLLRLGLPF VIAALTVIPL
AYYAIELRAN PEATFAAFWW KTVTVGPWPS GPIWFIWVLL AFDLAAALLY RVSPHLLDPI
NRLSLRAFAH PRDFFFIFLL ITGVLYIPAR LYFGPTHWFE LGPLSVQASR VLLYAAYFFV
GAGIGSANFE RGLLAAEGQM SQRGLGAWIV VTIVPYALLW VLITIKRQVL GNPPELPHWY
EAAYGFFFVI FSAAMMFAIL SYFLNNRRSE FSVLDRLQAD AYGMFLVHYP IVLWIQYWLF
DLSLPAIVKA TIAFVGSVLL SWGATWVLRQ IPGAKNVL