Gene BBta_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5392 
Symbol 
ID5148928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5615232 
End bp5615792 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID640560148 
Producthypothetical protein 
Protein accessionYP_001241272 
Protein GI148256687 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGAGCTATC CAGTCCGAAA GATCGGCGCG ACCCGGTTCG AGGTCATCAC AGCCGACATC 
ACCAAGCTCG GCGTTGACGC CATCGTCAAC GCCGCGAACT CGTCGTTGCT CGGCGGTGGC
GGCGTCGATG GCGCAATCCA TCGCGCGGCG GGGCCGGAGC TCGTCATGGA ATGCCGCATG
CTCCATGGCT GCAGGACCGG CGAGGCCAAG ATCACCCGGG GCTACCGGTT GCCGGCCCGC
CACGTGATCC ATACGGTGGG TCCGGTGTGG CAGGGCGGCG AGCGCGGCGA GCCGGAATTG
CTGGCGTCGT GCTATCGTCG CTCGATCGAG CTGTGCCACA AGCATTTGCT GGACTCCGTC
GCGTTTCCCG CGATCTCGAC CGGAATCTTC CGCTTCCCCG CCGATCTTGC CGCCTCGATC
GCGGTATCGA CCGCGGTCGA TGCGACCCGC GAGGAGACGT CGCTGTCGCA GATCGTGTTC
TGCTGCTTCT CCGAACAGAG TGCCGAGCTG CACGACCAGG CGTTGAGCGA GGCCATCATC
GACCGCGGCC ACGCGACGTG A
 
Protein sequence
MSYPVRKIGA TRFEVITADI TKLGVDAIVN AANSSLLGGG GVDGAIHRAA GPELVMECRM 
LHGCRTGEAK ITRGYRLPAR HVIHTVGPVW QGGERGEPEL LASCYRRSIE LCHKHLLDSV
AFPAISTGIF RFPADLAASI AVSTAVDATR EETSLSQIVF CCFSEQSAEL HDQALSEAII
DRGHAT