Gene BBta_5385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5385 
Symbol 
ID5150064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5609111 
End bp5609884 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID640560141 
Productputative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
Protein accessionYP_001241265 
Protein GI148256680 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.539985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.748944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGA CGCCCAAACC GCTCAACCGC CTCAAACAGG CCTGGCGCGA CAAGAGACCC 
ACCTTCGGCG CGATCGCCAC CATCCCGAGC ATTCAGACCG TGCGCATCAT GGCGCAGCAG
CTCGACTGGA TCATCGTCGA CCTCGAGCAC GGGCCGATCG ATCTTTCCAC CGCGCATGCG
ATGATCACGG CCACATCGGG CACACCCTGC GTCCCCCTGG TGCGCATCGC GGCCAACGAG
CCGCATCTGG CGAAAGCGCC GATGGATCTC GGCGCCCTCG GCATCAACTT CCCGATGATC
TCCAGCCGCA CAGAGGCCGA GAAGGCGGTG CGCAGCGTGC GCTATCCGCC CCGCGGCGAC
CGGCTGTGGG GACCGTTCCA CGCGCCGTTC CACTGGAACG TGTCGATGGC CGAGTACATG
GCGACCGCCG ATGACGACAT GGTCTGCATG GTGACGATCG AGCATGTCGA GGCCGTCGAG
CGCATCGACG AGATCATGGC CACGCCCGGC ATCGACATCG CGGTGATCGG CCCCGGCGAC
TTGGCCACCT CGATCAACAA GCGCGGCCAG CTCGATGATC CCGCAGTGAC ATCCCTGATC
GCCCGTGCCG AGGCCGGCAT CCTCAAATCC GGCGTGCCGA TCGGCGGCGC GGCGCGCTCG
GCCGAGCAGG CCAATGCGAT GATCGAACGC GGCTATGTGG CGCTGGCGCT GGGTTTCGAC
TGGTCCTTGT TCCAGCGCGG CATTGCCGCA AGCTTCGAAG GGATCAAACG CTGA
 
Protein sequence
MSATPKPLNR LKQAWRDKRP TFGAIATIPS IQTVRIMAQQ LDWIIVDLEH GPIDLSTAHA 
MITATSGTPC VPLVRIAANE PHLAKAPMDL GALGINFPMI SSRTEAEKAV RSVRYPPRGD
RLWGPFHAPF HWNVSMAEYM ATADDDMVCM VTIEHVEAVE RIDEIMATPG IDIAVIGPGD
LATSINKRGQ LDDPAVTSLI ARAEAGILKS GVPIGGAARS AEQANAMIER GYVALALGFD
WSLFQRGIAA SFEGIKR