Gene BBta_5373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5373 
Symbol 
ID5150178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5597330 
End bp5597860 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID640560130 
Productputative nuclease-like protein 
Protein accessionYP_001241254 
Protein GI148256669 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0199446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGATATT CACTTCTCTT CGTCTGCGGG GCTCTGCTGC TGGCTGCCGC GCCTTCTGCC 
GTCGCGCGCG ACCTTGTTGG CCGCGGCAGC ATCGTCGATG GCGATACGCT GGATCTTCAC
GATCAGCGCA TTCGTCTGTG GGGCATCGAC GCGCCGGAGA GCGCGCAATT GTGCCGCGGC
CGCGACCGCA AGCCATATCG CTGCGGCGCG CTCGCCGCCA ACACGCTCGA CGCGTTCACC
CGCGGCAAGA CCATCCGCTG CATGCCCGTG GATGGCGACC GTTATGGCCG CGTCGTCGCG
CGCTGCGCGG CCGGCGGTGT CGATCTCGGC CAGTTCATGG TGTCGCGCGG GCTTGCATTG
GAGGAGCCGC AATATTCCCA CGGTCATTAC GCGGCCGATC AGGTCGCAGC CCGCCGTGCC
GGGCGCGGCG TGTGGTCCGG CCGCTTCGTC GAGCCGTCAC TCTATCGCAG CTGCATGCAC
GCCGCCGGCA CGCGGTCCGT CTGCTCGGAA GGCGCGACCG GCTGGCGATG A
 
Protein sequence
MRYSLLFVCG ALLLAAAPSA VARDLVGRGS IVDGDTLDLH DQRIRLWGID APESAQLCRG 
RDRKPYRCGA LAANTLDAFT RGKTIRCMPV DGDRYGRVVA RCAAGGVDLG QFMVSRGLAL
EEPQYSHGHY AADQVAARRA GRGVWSGRFV EPSLYRSCMH AAGTRSVCSE GATGWR