Gene BBta_5369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5369 
Symbol 
ID5150222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5595063 
End bp5595878 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID640560127 
Producthypothetical protein 
Protein accessionYP_001241251 
Protein GI148256666 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00338778 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGATCTGC TCGGTGCGAG CCTGCCTTAC GCCACCTTCT ACCCCGCGGT CGTGTTTTCG 
GCGTTGTTCG GTGGCATCCC CTCGGCGATT TTTGCCACGT GGTTGTCGGC GACGGTGGTG
CTGGTCGCTT TCACCGACCG GCCGGGACAT GGTGAAGCCG TCAATCTCGT CGCATTCCTC
GGCACGGCTG CGCTGGTCAT CTGGCTGGCC AATCTCTGCC GGAACGCGCT GCTCGAGCTC
AAGCGTAGCG AGCATGCGCG CGAATTGCTG CTTGGCGAGC TCCGCCATCG CGTGAACAAC
CAGCTCGCGG TGTTTCAGTC GATCGTCCGG TCGAGCCTGT CGGGCGAGGA TCATGACAAG
GGCGAGGCGA TCTCGCTCAG GCTCGAGGCT GTGGCGCGTG CCAACACGCT CGCCTGGTCC
GACCACCGCA TCATGACGCT GCGCATGCTG ATCGAGATGG AGCTGCAGCC CTATCGGGTG
CCGGGCGTGA TCGCGGTGGA GGGAGCCGAT GTGCAATTGG GGCCGGACGC GGTGCGCAAT
CTTGCGCTGG TGTTCCACGA ACTCGCGACC AACGCCGTCA AATATGGTGC GCTGCGCGGC
GATGGCGGCC GGCTCGAGGT GCAGCTGGCG CAAGACGGCG GTCGCACGGT CGTGACCTGG
CGCGAGCTGT GTGCGCATGC GGTCGAGCCG CCGCTGCGCG AGGGATTTGG CATGCGCATG
ATCCGCGCAA GCCTTGCCGC GATCGGCGGC AGTGTCGAGC AGGATTTTCG CGCCGACGGA
CTGCTCTGCC GGATCAGGTT CGAAGCGGGC GCATGA
 
Protein sequence
MDLLGASLPY ATFYPAVVFS ALFGGIPSAI FATWLSATVV LVAFTDRPGH GEAVNLVAFL 
GTAALVIWLA NLCRNALLEL KRSEHARELL LGELRHRVNN QLAVFQSIVR SSLSGEDHDK
GEAISLRLEA VARANTLAWS DHRIMTLRML IEMELQPYRV PGVIAVEGAD VQLGPDAVRN
LALVFHELAT NAVKYGALRG DGGRLEVQLA QDGGRTVVTW RELCAHAVEP PLREGFGMRM
IRASLAAIGG SVEQDFRADG LLCRIRFEAG A