Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5366 |
Symbol | |
ID | 5150219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5592589 |
End bp | 5593482 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640560124 |
Product | putative inner membrane transport protein of unknown function |
Protein accession | YP_001241248 |
Protein GI | 148256663 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00165583 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGACCC GCTCCGATCT CACCCGCGAG CTCGCCCTCC TGCTCGTGCT GTCCACCTTG TGGGGCGCCT CCTACACCTT CATCAAGATC GGCGTCGAGA CCATCCCGCC GCTGACCCTG ATCGCTGCAC GGACCTTGAT CGCAGGACTG CTGCTCGCCG CGATCATCCG CAGCCGCGGC CTCGGCTGGC CGCGCGAGCG CGCGACCTGG CGCCGCTTTC TGATTCAGGC CGGCCTCAAC AGCGTCGTGC CCTTCACGCT GATCGCCTGG GCCGAGCGCA CCGTCGAGGC CGGGCTCGCC ACGATCCTGA ACGCGACCTC GCCGATCTTC GCCTTCCTGC TGACGACGCT GGTCACGCGC CACGAGCCGG TCACGCGGCG CAAGCTCGGC GGCATCGCCA CCGGCCTTGC CGGCACCTGC CTCATCGTGG GGACCGAGGC GCTGGGCGGG CTTGGCCGCG AGCTGTGGGC CCAGCTTGCG ATCGTCGCCG CCACCATCTG CTATGCGGGA GCGGCAATCA TGGGCAAGCG CTTCAAGGGG CTCGACCCGA TGCTGCCCGC GGCCGGCTCG CTGCTGTCGG GCGCCGTGAT CCTGATGCCG CTCGCGCTCA TCGTCGACCA TCCCTGGACG CTGCAGCCGT CGCTGCGCTC GGTGCTGGCG CTGGTCGCGC TGGCGACCGT CTCGACCGCC GCCGCGATGG TGATCTATTT CCGCCTGGTG CAGACCCTCG GCTCGATCGG CGCGACCGCG CAATCCTATC TGCGCGTGCC GATCGGCGTC GCCATCGCCG TGGCCGGGCT CGGCGAGCAG CTGGCACCAA CGGCCTGGAT CGGCCTCGCC TGCGTCGTCG TCGGCGTCGT CGCAATGACG CTGCCGGCGC GCAAGGCGGC ATAG
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Protein sequence | MQTRSDLTRE LALLLVLSTL WGASYTFIKI GVETIPPLTL IAARTLIAGL LLAAIIRSRG LGWPRERATW RRFLIQAGLN SVVPFTLIAW AERTVEAGLA TILNATSPIF AFLLTTLVTR HEPVTRRKLG GIATGLAGTC LIVGTEALGG LGRELWAQLA IVAATICYAG AAIMGKRFKG LDPMLPAAGS LLSGAVILMP LALIVDHPWT LQPSLRSVLA LVALATVSTA AAMVIYFRLV QTLGSIGATA QSYLRVPIGV AIAVAGLGEQ LAPTAWIGLA CVVVGVVAMT LPARKAA
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