Gene BBta_5348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5348 
Symbol 
ID5155994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5574216 
End bp5574995 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID640560108 
Producthypothetical protein 
Protein accessionYP_001241232 
Protein GI148256647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.611011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0360105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGG TCAGCAGTGC CGACAGAGTG GAACCTGCGC GGGACGCAGC CGAGCGCGGT 
CCGCTGCTGC TCTGGATGAT CTTTACCGGG CTCACCGTGT TCGCCGCCGT GGTGCTGGCG
CGCTACGGCT ATTTCCATCT GATGGTCGCC TCCGACCGTA CCTACATCTC CAGCGTCGTC
GCCGTGCTCT ATCTCGTGAC CTGCTGTCAC TGCTTCTGGC GGACGAGGGC GATCGCGCGC
GAGGCGGATG CGGCGCGGCG CTGCCGTGCG GTCTTGATCG GGGCCGATGC CGAGCGCGCG
CTCGAACCCG ATGCGCAATT GCTGCCCAAA GGGCTCGTCA CCAACCACAT TTACAGCCTC
GTCACCAAGG CGCGGACGCA AGGGGCAGGG CGGCTCGACC AGACACTGCT GTTGCGCACG
CTGGCCGACC GGCTGCGCGG CTCCAACGGC TTCGGCGGCT TCGCCTCGGA TACTTTGATG
AAGCTCGGCC TGCTCGGCAC CATCATCGGC TTCATCATCA TGCTGGCGCC GATCGCCGGC
CTCGACGTCA ACGACAAGCT GGCGATGAAA TCGTCGATGG GGCTGATGAG CGACGGCATG
GCGGTGGCGA TGTACACGAC GCTGGCCGGC CTCGTCGGCT CGATCCTGGT GCGTATCCAG
TACTACATGC TGGACGCGGC GACGGGGCGC GTGTTCTCCG ATGCCGTGAT GCTGACGGAA
ACGCGGGTGA CGCCGCGGCT CGAGCGCGCG ATGGACCGCG CCGCGGAGCA GGGCGCATGA
 
Protein sequence
MSVVSSADRV EPARDAAERG PLLLWMIFTG LTVFAAVVLA RYGYFHLMVA SDRTYISSVV 
AVLYLVTCCH CFWRTRAIAR EADAARRCRA VLIGADAERA LEPDAQLLPK GLVTNHIYSL
VTKARTQGAG RLDQTLLLRT LADRLRGSNG FGGFASDTLM KLGLLGTIIG FIIMLAPIAG
LDVNDKLAMK SSMGLMSDGM AVAMYTTLAG LVGSILVRIQ YYMLDAATGR VFSDAVMLTE
TRVTPRLERA MDRAAEQGA