Gene BBta_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5338 
Symbol 
ID5155870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5568080 
End bp5568625 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content62% 
IMG OID640560100 
Producthypothetical protein 
Protein accessionYP_001241224 
Protein GI148256639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.872676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.185975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGC TTTGGGCGGG GCTGTGTTTG ACCGCAGTGC TGTTATCAGG ATGCGCGACC 
GACAAGGTCG TGACGGATGT TGCGGCCACG ATGCAGCGAG TTGGACAGCC GGCGGCGGGA
AAATCCCGTG TCGTCGTGCT GGCCGCACAG AAAAGGGGCC TTCTTTTCCA GGGGACCGTC
TGTGATGTGA CGCTTGATGG GGCGCCGCTT GGGGAGCTCA AGATCGGCAC TTATATGCAC
ATTGATGTTC CCGCCGGACG TCATCAACTC GGAGCGACGC AGACCCTGTT TGCGGGGCAG
ACTCAGACCG ACGTGACAAC CCAGGCTGGT CGAGCCTATT ACTTCCGTGT CCAGCCCAGC
CAGCGCTCCA AGGCCATTTC GGCAGGCGCG ATGGTTGGTG GTGTTGCCGG TGCGCTGGTC
ACCTCGGCGG CCTCGTCCGG AAGCGACAAC CCCGGACCCG TCGATTTTGT GCCGCTGGAC
GAAGCGGCGG CCCGGGCCAT GATCGAAGAA TTCCAATTGG TGGATGCAGA AGGCAGGGGC
GGGTGA
 
Protein sequence
MFRLWAGLCL TAVLLSGCAT DKVVTDVAAT MQRVGQPAAG KSRVVVLAAQ KRGLLFQGTV 
CDVTLDGAPL GELKIGTYMH IDVPAGRHQL GATQTLFAGQ TQTDVTTQAG RAYYFRVQPS
QRSKAISAGA MVGGVAGALV TSAASSGSDN PGPVDFVPLD EAAARAMIEE FQLVDAEGRG
G