| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5334 |
|---|
| Symbol | |
|---|
| ID | 5151063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5562938 |
|---|
| End bp | 5563768 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640560096 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241220 |
|---|
| Protein GI | 148256635 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization |
|---|
| TIGRFAM ID | [TIGR03214] putative allantoin catabolism protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.716705 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGC CGAACTACTT CGTGCCGCAG GGCGGCCATC CGCCGCAGAC CGATCTGCTC
ACCGGGCGCG CCGTGTTCAC CGAGGCCTAT GCCGTCATTC CCAAGGGCGT GATGCGCGAC
ATCGTGACGT CGGTGCTGCC GTTCTGGGAC AAGACCCGGA CCTGGGTGAT CGCGCGTCCC
CTATCGGGCT TCGCCGAGAC GTTCTCGCAA TACATCGTCG AGGTCTCGCC CGGCGGCGGC
AGCGCCCAGC CCGAGCCCGA TCCGGAGGCC GAAGGCGTGC TGTTCGTGGT GTCAGGCGAG
ATCGCGCTGA CCATCGCCGG CACCGCGCAT CGCCTTGGCA AAGGCGGCTA CGCCTTCCTG
CCGCCGGGCT GCAAATGGAC GCTGACGAAC GACGGCGCGG CGCCCGCGAC CTTCCACTGG
ATCCGCAAGG CCTATGAAGC CATCCCCGGC ATCCCCGCGC CGGACGCCTT CGTCACCAAC
GAGGCGGCGA TCGCGCCTGT CGGGATGCCG GGCACCGATG GCCGCTGGGC CACCACCCGC
TTCGTTGATC CGCTCGACGT CCGCCACGAC ATGCATGTCA ACATCGTCAC CTTCGAGCCG
GGTGCTGTCA TCCCGTTCCT GGAGACCCAT GTGATGGAGC ACGGCCTCTA CGTGCTCGAA
GGCAAGGCGG TCTACAAGCT CAACCGCGAC TGGGTCGAGG TGGAGGCCGG CGACTTCATG
TGGCTGCGCG CCTTCTGCCC GCAGGCCTGC TACGCCGGCG GCCCCGGCCG CTTCCGCTAC
CTGCTCTACA AGGACTCCAA CCGCCACATG AAGCTGCGGC CGTTCCGGTG A
|
|---|
| Protein sequence | MDKPNYFVPQ GGHPPQTDLL TGRAVFTEAY AVIPKGVMRD IVTSVLPFWD KTRTWVIARP
LSGFAETFSQ YIVEVSPGGG SAQPEPDPEA EGVLFVVSGE IALTIAGTAH RLGKGGYAFL
PPGCKWTLTN DGAAPATFHW IRKAYEAIPG IPAPDAFVTN EAAIAPVGMP GTDGRWATTR
FVDPLDVRHD MHVNIVTFEP GAVIPFLETH VMEHGLYVLE GKAVYKLNRD WVEVEAGDFM
WLRAFCPQAC YAGGPGRFRY LLYKDSNRHM KLRPFR
|
|---|
| |