Gene BBta_5328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5328 
Symbol 
ID5155353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5556098 
End bp5556499 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content63% 
IMG OID640560090 
Productputative two-component response regulatory protein 
Protein accessionYP_001241214 
Protein GI148256629 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.247483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.152499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGGA TTCTGGTGGT CGACGATCAG AAGGATGTGC GGGCCATGAT CAGCATGGTG 
CTCCGCGTCA ATCAGTTCGA GGTGGTCGAG GCGGGAACCG CGACCGCTGG GTTGCAGCTG
TTCCGCGACC AGGCCTTCGA TGCCGTGATC GTCGACATTT ACCTCGATGA TTCGAATGGT
CTCGATCTGG TCAGCGGGAT GCGGGCCCTG GTTCCCGATG TGCCGGTCGT GGCCGTCTCC
GGCATGAGTG CATTCGATGG GGCGGCGATG TCGGAGGAAC TGACCCGTGT GGTCTATCTG
CAGAAGCCAT TCCGGCCGAA CGAACTGATG CGCGCTGTCG AGACGGCGCG CAAAGCGGTG
CGGGACAGGC CTGCAGCGAC GCTCGCTGCC TGCGCGGGCT GA
 
Protein sequence
MSRILVVDDQ KDVRAMISMV LRVNQFEVVE AGTATAGLQL FRDQAFDAVI VDIYLDDSNG 
LDLVSGMRAL VPDVPVVAVS GMSAFDGAAM SEELTRVVYL QKPFRPNELM RAVETARKAV
RDRPAATLAA CAG