Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5327 |
Symbol | livK |
ID | 5155352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5554870 |
End bp | 5555988 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560089 |
Product | high-affinity branched-chain amino acid ABC transporter (substrate-binding protein) |
Protein accession | YP_001241213 |
Protein GI | 148256628 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.25236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAC TCAAACTCAT TGGTCTGGCG CTGGGCGCGT CGCTTGCGCT CTCGACCGCC GCCTACGCCG AAGACATCAC CATCGCCGTG GCCGGCCCGA TGACCGGCGG CGAGTCGGCC TTCGGCCGCC AGATGCAGAA CGGCGCCGAG ATGGCGATCG CCGATCTCAA TGCTGCAGGC GGCGTGCTCG GCAAGAAGCT CGCTTTGCAG GTGGGTGACG ACGCCTGCGA TCCGAAGCAG GCCCGCTCGG TCGCCGAGAA GCTCGCCGGC TCCGGCATTC CGTTCGTCGC CGGCCATTTC TGCTCGTCGT CGTCGATCCC GGCCTCCGAG GCCTATGCCG ACAGCAACGT GCTGCAGATC ACCCCGGCTT CGACCAACCC GCTGTTCACC GAGCGCAAGC TGTGGAACGT GGCGCGCGTC TGCGGCCGTG ACGATCAGCA GGGCCTCGTC GCCGCCAACT ACATCGCGAA GAACTTCAAG GGCAAGAACA TCGCGATCCT CAACGACAAG ACCACCTACG GCAAGGGTCT CGCCGACGAG ACCAAGAAGG CGCTCAACAA GGCCGGCGTC ACCGAGAAGA TGTTCGAGTC GTACAACAAG GGCGACAAGG ACTTCAACGC GATCGTGTCG CGCCTGAAGC GTGAGAACAT CGACCTCGTC TATGTCGGCG GCTATCATCA GGAAGCCGGC TTGATCCTGC GCCAGATGCG CGATCAGGGC CTCAAGACCA TCCTGATGGC GGGCGATGCG ATGAACGACA AGGAATTCGC GTCGATCACC GGCCCGGCCG CCGAAGGCAC GCTGTTCACC TTCGGCCCCG AGCCGCGCAA CAAGCCGACC GCGAAGGCGA TCGTCGACAA GTTCAAGGCC AAGAACATCG ACCCCGAGGG CTACACGCTC TACACCTACG CCGCCATCCA GGTCTGGTCG CAGGCCGTGA AGAAGGCCAA CACCACCGAC GCCAAGAAGG TGATGGACAC CATCAAGGCC GGCGAGTGGG ACACGGTTCT CGGCAAGCTC GGCTTCGACG CCAAGGGCGA CATCAAGCAG ATCGACTACG TCGTCTACAA GTGGGACGCC AAGGGCGGCT ACGCCGAGCT CGGCAGCAAG GGCTCCTGA
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Protein sequence | MKPLKLIGLA LGASLALSTA AYAEDITIAV AGPMTGGESA FGRQMQNGAE MAIADLNAAG GVLGKKLALQ VGDDACDPKQ ARSVAEKLAG SGIPFVAGHF CSSSSIPASE AYADSNVLQI TPASTNPLFT ERKLWNVARV CGRDDQQGLV AANYIAKNFK GKNIAILNDK TTYGKGLADE TKKALNKAGV TEKMFESYNK GDKDFNAIVS RLKRENIDLV YVGGYHQEAG LILRQMRDQG LKTILMAGDA MNDKEFASIT GPAAEGTLFT FGPEPRNKPT AKAIVDKFKA KNIDPEGYTL YTYAAIQVWS QAVKKANTTD AKKVMDTIKA GEWDTVLGKL GFDAKGDIKQ IDYVVYKWDA KGGYAELGSK GS
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