| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5323 |
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| Symbol | livH |
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| ID | 5149346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5550884 |
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| End bp | 5551801 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640560085 |
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| Product | high-affinity branched-chain amino acid ABC transporter (permease protein) |
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| Protein accession | YP_001241209 |
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| Protein GI | 148256624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.446123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTATT TCGCCCAGCA GCTCATCAAC GGCCTCGTCC TCGGCTCGAT CTACGGCCTG
ATCGCCATCG GCTACACCAT GGTTTACGGC ATCGTCGGCA TGATCAATTT CGCCCATGGC
GACGTGTTCA TGATCGGCGG CTTCATCGCG CTGATCTCGT TCCTGGTCCT GGTGTCGGTC
GGGCTCACCG CAGTGCCGGT CATTCTGCTG ATCGTGCTGC TGGTCTCGAT GGCGATCACC
GCGCTCTATG GCTGGACCAT CGAGCGCATC GCCTATCGTC CGCTGCGCCA CTCCTTCCGG
CTGGCGCCGA TGCTGTCGGC GATCGGCATG TCGTTCGTGT TGACGAATTT CTCGCAGGTG
TCGCAGGGCG CGCGCGTCAA GCCGGTCCCG CCGATCGTCA CAGGCGGCTA CACGCTGCAC
GAGGGCGAGA GCGGCTTTGT CGTCCAGCTG TCCAACATCC AGATCGTCGT GGTGATCACT
ACGATCGTGC TGCTCGGCCT GTTCACCTGG CTGGTGTCGC GCACCCGGCT CGGCCGCGAC
ATGCGCGCCT GCGAGCAGGA CCAGACGATG GCGGCACTGC TCGGCGTCGA CGTCGACCGC
ACCATCTCGA TGACCTTCGT GATCGGTGCG GCGCTCGCCG CCGTCGCCGG CATGATGTAC
CTGTTATATT ATGGCCTGGT CGATTTCTTC ATGGGCTTCG TCGCCGGCAT CAAGGCCTTC
ACAGCCGCCG TGCTCGGCGG CATCGGCTCG CTGCCCGGCG CGATGCTCGG TGGTCTCGCG
ATCGGCCTGA TCGAGACGTT CTGGTCGGCC TATTTCTCGG TCGAGTACAA GGACGTGGCG
GCGTTCTCGA TCCTCATCGT GGTGCTGATC TTCATGCCGA CCGGCCTCTT GGGCCGTCCC
GAAGTCGAAA AAGTCTGA
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| Protein sequence | MDYFAQQLIN GLVLGSIYGL IAIGYTMVYG IVGMINFAHG DVFMIGGFIA LISFLVLVSV
GLTAVPVILL IVLLVSMAIT ALYGWTIERI AYRPLRHSFR LAPMLSAIGM SFVLTNFSQV
SQGARVKPVP PIVTGGYTLH EGESGFVVQL SNIQIVVVIT TIVLLGLFTW LVSRTRLGRD
MRACEQDQTM AALLGVDVDR TISMTFVIGA ALAAVAGMMY LLYYGLVDFF MGFVAGIKAF
TAAVLGGIGS LPGAMLGGLA IGLIETFWSA YFSVEYKDVA AFSILIVVLI FMPTGLLGRP
EVEKV
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