Gene BBta_5304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5304 
Symbol 
ID5149574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5535176 
End bp5536111 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID640560068 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001241192 
Protein GI148256607 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.664589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.137036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CGGCGGCCGA GATCGCGATC GACGTCAAGG GACTGAGCAA GTCCTTCGAC 
GGCCGCGAGG TTGTGCATGA TCTGTCGATG CAGGTGAAGC GGGGATCGAT CTATGGCTTT
CTCGGTCCGA ACGGCTCCGG CAAGACGACG ACGATCCGGA TGCTGTGCGG GCTGCTGACC
CCCGATAGCG GCGAGGGCAC CTGTCTCGGC TTCGACATCC GCCGCGATGC CGACAAGATC
AAGCGCCGCG TCGGTTACAT GACGCAACGT TTCAGCCTCT ACCAGGATCT CTCGGTGCGG
GAGAATCTCG AATTCGTCGC GCGTCTCTAC GGAATGCCGA ATCCGCATCA GGTGGCGCGC
GACATGGTAC AGCGGCTTGG CCTCGGCGGA CGCGAGCGGC AGCTCGCCGG CGAATTGTCG
GGCGGCTGGA AGCAGCGGCT CGCACTCGGC GCCTGCACCT TGCCGAATCC GCAATTGCTG
TTGCTGGACG AGCCCACCGC CGGCGTCGAT CCCAAGGCGC GGCGCGACTT CTGGAACGAG
ATCCATGCGC TGGCGGGCGA GGGGCTGACG GTGCTGGTCT CAACCCACTA CATGGACGAG
GCCGAACGCT GTCACGAGAT CGCCTACATC GCCTATGGCC ATCTGTTGGC GCATGGCACG
GTCCCCGAGG TGATCGCGCA ATCGGCGCTG GCGACATACA CGGTCAGCGG CAATGACCTG
CGCGACCTCG CGGCCGATCT CGCCGGCAAG CCGGGCATCG ACATGGTGGC GCCGTTCGGC
ACCAGCCTGC ATGTCTCAGG GCGCGACCAT TCGGCGCTGG AGGCCTCGAT CGCGCCCTGG
CGCGAGAAGC CGGGATTGCA CTGGCAGTCC GCCGCGCCCT CGCTCGAGGA CGTCTTCATC
GATCTGATGA ACCGCTCGCG GGACAATTTC CGATGA
 
Protein sequence
MTEAAAEIAI DVKGLSKSFD GREVVHDLSM QVKRGSIYGF LGPNGSGKTT TIRMLCGLLT 
PDSGEGTCLG FDIRRDADKI KRRVGYMTQR FSLYQDLSVR ENLEFVARLY GMPNPHQVAR
DMVQRLGLGG RERQLAGELS GGWKQRLALG ACTLPNPQLL LLDEPTAGVD PKARRDFWNE
IHALAGEGLT VLVSTHYMDE AERCHEIAYI AYGHLLAHGT VPEVIAQSAL ATYTVSGNDL
RDLAADLAGK PGIDMVAPFG TSLHVSGRDH SALEASIAPW REKPGLHWQS AAPSLEDVFI
DLMNRSRDNF R