Gene BBta_5303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5303 
Symbol 
ID5155881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5534022 
End bp5535179 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content64% 
IMG OID640560067 
Productputative ABC transporter (fused ATP-binding and permease components) 
Protein accessionYP_001241191 
Protein GI148256606 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0664808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCG CCTCCGTCCA GCATCGCTTC TCCGAGCCGC GCTTCGGCTT CTGGCGCCGG 
ACCTATGCGA TGCTGGTCAA GGAGTTCATC CAGCTCAGGC GCGACCGGGT GTCGTTCGCC
ATGATCGTGA TGCTGCCGGT GATGCAGCTG ATGCTGTTCG GCTATGCGAT CAACACCACG
CCGCACCATC TTCCCGCGGC AGTGCTTCTG CAGGAGGACA GCGATCTCGG CCGTTCGATC
CTCAAGGCCA TGGAGAATAC CGCCTATTTC CGCTTCACCC GCGAGGTGCA TGACGTTGCC
GAGTTCGACG ATCTGCTGCT CTCGGGCAAG GTGCTGTTCG GCGTCGAGAT CCCGCGCGGC
TTCGAGCGCG CGGTCCGCCG CGGCGATCGT CCGGCGCTGC TGGTGGCGGC CGATGCCACC
GATCCCGTCG CCGCATCCTC GGCGCTGTCC TCACTCGGCA TGATCGTGCA GACCGCGCTG
GCGCATGATC TCTACACCGG GGACCCGGTC TCGGCGCCGT TCGAGATCCG GGCTCATGCC
CGCTACAACC CAGCCGCGTC GTCGCGGCTC AACATTGTGC CGGGCCTGGT CGGCACCATC
CTGACCATGA CCATGCTGAT CTTCACCGCG CTCTCGGTGA CGCGGGAGAT CGAGCGCGGC
ACGATGGAGA GTCTGTTGTC GATGCCGATC ACGCCGGTCG AGGTGATGCT GGGTAAGATC
ATCCCCTACG TGCTGGTCGG CTTCCTGCAG GCCTCGATCA TCATCGGCAT CGGCGTGTTC
CTGTTCGGCG TGCCGGTGAT GGGCAGTCTG CTGCTGCTCG CGCTGCTGTC CACGCTGTTC
ATCGCGACCA ATCTCTCGAT CGGCTACACG TTCTCCACCT TGGCGCAGAA CCAACTGCAG
GCGATGCAAC TGTCGATGAT GTTCTTCCTG CCAAGCATTC TGCTGTCCGG CTTCATGTTC
CCGTTTCTGG GCATGCCGCA ATGGGCGCAG ATCGTCGGTG AATGCCTGCC GCTGACGCAC
TACCTGCGGA TCGTCCGCGC CATCATGCTG AAGGGCTCGA CTCTGGCGAA CCTGCAGCAC
GATACGATCG CCCTGTTCGG CCTCATGCTG TTCGCCATGA CCGTGGCCGT CCTGCGCTTC
CGCCGCACCC TCGATTGA
 
Protein sequence
MKGASVQHRF SEPRFGFWRR TYAMLVKEFI QLRRDRVSFA MIVMLPVMQL MLFGYAINTT 
PHHLPAAVLL QEDSDLGRSI LKAMENTAYF RFTREVHDVA EFDDLLLSGK VLFGVEIPRG
FERAVRRGDR PALLVAADAT DPVAASSALS SLGMIVQTAL AHDLYTGDPV SAPFEIRAHA
RYNPAASSRL NIVPGLVGTI LTMTMLIFTA LSVTREIERG TMESLLSMPI TPVEVMLGKI
IPYVLVGFLQ ASIIIGIGVF LFGVPVMGSL LLLALLSTLF IATNLSIGYT FSTLAQNQLQ
AMQLSMMFFL PSILLSGFMF PFLGMPQWAQ IVGECLPLTH YLRIVRAIML KGSTLANLQH
DTIALFGLML FAMTVAVLRF RRTLD