Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5303 |
Symbol | |
ID | 5155881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5534022 |
End bp | 5535179 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560067 |
Product | putative ABC transporter (fused ATP-binding and permease components) |
Protein accession | YP_001241191 |
Protein GI | 148256606 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0664808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGCG CCTCCGTCCA GCATCGCTTC TCCGAGCCGC GCTTCGGCTT CTGGCGCCGG ACCTATGCGA TGCTGGTCAA GGAGTTCATC CAGCTCAGGC GCGACCGGGT GTCGTTCGCC ATGATCGTGA TGCTGCCGGT GATGCAGCTG ATGCTGTTCG GCTATGCGAT CAACACCACG CCGCACCATC TTCCCGCGGC AGTGCTTCTG CAGGAGGACA GCGATCTCGG CCGTTCGATC CTCAAGGCCA TGGAGAATAC CGCCTATTTC CGCTTCACCC GCGAGGTGCA TGACGTTGCC GAGTTCGACG ATCTGCTGCT CTCGGGCAAG GTGCTGTTCG GCGTCGAGAT CCCGCGCGGC TTCGAGCGCG CGGTCCGCCG CGGCGATCGT CCGGCGCTGC TGGTGGCGGC CGATGCCACC GATCCCGTCG CCGCATCCTC GGCGCTGTCC TCACTCGGCA TGATCGTGCA GACCGCGCTG GCGCATGATC TCTACACCGG GGACCCGGTC TCGGCGCCGT TCGAGATCCG GGCTCATGCC CGCTACAACC CAGCCGCGTC GTCGCGGCTC AACATTGTGC CGGGCCTGGT CGGCACCATC CTGACCATGA CCATGCTGAT CTTCACCGCG CTCTCGGTGA CGCGGGAGAT CGAGCGCGGC ACGATGGAGA GTCTGTTGTC GATGCCGATC ACGCCGGTCG AGGTGATGCT GGGTAAGATC ATCCCCTACG TGCTGGTCGG CTTCCTGCAG GCCTCGATCA TCATCGGCAT CGGCGTGTTC CTGTTCGGCG TGCCGGTGAT GGGCAGTCTG CTGCTGCTCG CGCTGCTGTC CACGCTGTTC ATCGCGACCA ATCTCTCGAT CGGCTACACG TTCTCCACCT TGGCGCAGAA CCAACTGCAG GCGATGCAAC TGTCGATGAT GTTCTTCCTG CCAAGCATTC TGCTGTCCGG CTTCATGTTC CCGTTTCTGG GCATGCCGCA ATGGGCGCAG ATCGTCGGTG AATGCCTGCC GCTGACGCAC TACCTGCGGA TCGTCCGCGC CATCATGCTG AAGGGCTCGA CTCTGGCGAA CCTGCAGCAC GATACGATCG CCCTGTTCGG CCTCATGCTG TTCGCCATGA CCGTGGCCGT CCTGCGCTTC CGCCGCACCC TCGATTGA
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Protein sequence | MKGASVQHRF SEPRFGFWRR TYAMLVKEFI QLRRDRVSFA MIVMLPVMQL MLFGYAINTT PHHLPAAVLL QEDSDLGRSI LKAMENTAYF RFTREVHDVA EFDDLLLSGK VLFGVEIPRG FERAVRRGDR PALLVAADAT DPVAASSALS SLGMIVQTAL AHDLYTGDPV SAPFEIRAHA RYNPAASSRL NIVPGLVGTI LTMTMLIFTA LSVTREIERG TMESLLSMPI TPVEVMLGKI IPYVLVGFLQ ASIIIGIGVF LFGVPVMGSL LLLALLSTLF IATNLSIGYT FSTLAQNQLQ AMQLSMMFFL PSILLSGFMF PFLGMPQWAQ IVGECLPLTH YLRIVRAIML KGSTLANLQH DTIALFGLML FAMTVAVLRF RRTLD
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