| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5301 |
|---|
| Symbol | |
|---|
| ID | 5155879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5530776 |
|---|
| End bp | 5532455 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640560065 |
|---|
| Product | putative feruloyl esterase |
|---|
| Protein accession | YP_001241189 |
|---|
| Protein GI | 148256604 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0117513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAA CTGGGGCGTG GGTGTTGGCG GGATTGAGCC TGGTCGGCAC TGCGACGACG
GCTCGGGCCG AGGAGGGCGG CTGCAGCAAG GTGACTGCGG AAGCGCTCAA CATGCCCGGC
CTGACCTTGA CCGGATCGAA GCTGCAGGAG GCGGGCGACG GCCTGCCGCG GCACTGCATC
CTCTCCGGCA AGGTCAACGA GCGCACGGGT CTCGACGGCC ATGCTTATGC GATCCAATTC
GAGATCCGCC TGCCCGAAAG CTGGAACGGT CGCTTCCTGC ATCAGGTCAA TGGCGGCAAT
GACGGCGTCG TGCTGCCGGC TCTCGGCGAC AAGGCGGACG GCTTGGTGAG CGGTGGCGTG
ACGCCGCTCG CCCGCGGCTT CGCCGTGCTA TCCTCCGACA GCGGTCATTC CGGCAACGAT
CCCGCCAACA AGCCGCGCGG GCTCGCAGCC GGCTCGGCCT TCGGGCTCGA TCCGCAGGCG
CGGCGCGACT ATGGCTATGC CGCCGACATG ACACTTGCCC CGATCGCCAA GGCGATCATC
GCCGCGCATT ACGGCAAGAA GCCCGATTAT TCCTACATCG CGGGATGCTC CAATGGCGGG
CGTCACACGA TGGTGGCGGC CGAGCGCATG CCCGAACAAT ATGACGGTTT CCTGGTCGGC
AATCCCGGCT TCAACCTGCC GCGTGCGGCC GTGCAGCACG CCTGGGACGT GCAGGCGCTG
ACCAAGGCTG ATGCCGACAT CCGCAAATCG ATCACCCGCG AGGACGCCAA GCTGATCTCG
TCCAAGATCA TCGAGGCCTG CGACGGGCTC GACGGCGCCA GGGACGGGCT CACGGCAAAC
CTGAAGGCGT GCCAGAAGAC GTTCAGTTTC GACAGCCTGC GCTGTGTGGC CGGCAGCACC
GAAGCGTGCC TGCCGTCCGC CAAGGTCGAT GCCTTGAAGA AGGTCTTCGC CGGGCCGCAA
AATTCGAAGG GCGAGGCGCT CTATTCGGAT TGGCCGGTCG ATGGCGGCGT CGGCACCGGC
AATTGGCGCG CCTGGAAGGT CGAGAGCCCG GTCGCGCCTT GGAACAATCT GCCGATCATC
GCCACCATGG GCGGGGCCTC GCTCAACTAC ATCTTCTCGA CGCCGCCGGT CGAGGTCGAA
GGCTCGCCCG ACAAGCTCGT CGAGAAGCTG CAGAGCTACG ACTTCGACAA GGATGCGCCG
AAGATCTTCG CGAAGGAAGG GCCGTTCACG GAGTCGGCGA TGGAGTTCAT GGCGCCGCCT
GCGGTCGACA ATCCGACCCT GCCGGCGTTC CAGGGCGGTG CGCGCAAGAT GCTGATCTAT
CACGGCCAGG CCGATCCGGT GTTCTCGGTC AACGACACGA TTCGCTGGTA TGAAAAGCTG
AATGCCAATG TGGCGGGCAA GGCCGACGGC TTCGCCCGCT TGTTTGCATT GCCGGGCGAG
ACGCATTGTG GTGGCGGCGT CACCTTGGAA AAGTTCGACG CGCTCGGCGC GTTGATGGAC
TGGGTCGAGA AGGGCAAGGC GCCAGAGGCG ATCACGGCCT CGGTCAGTGC CGCCAACAAG
GAGCTGCCTG CGGGCTGGAG CCCGCAGCGG ACGCGGCCTC TGTGCCCGTG GCCGAAATTC
GCCAAATATA CGGGCGGTGA TGTCGAGCAG GCGTCGTCCT TCACCTGCGC CACGGAGTAG
|
|---|
| Protein sequence | MIRTGAWVLA GLSLVGTATT ARAEEGGCSK VTAEALNMPG LTLTGSKLQE AGDGLPRHCI
LSGKVNERTG LDGHAYAIQF EIRLPESWNG RFLHQVNGGN DGVVLPALGD KADGLVSGGV
TPLARGFAVL SSDSGHSGND PANKPRGLAA GSAFGLDPQA RRDYGYAADM TLAPIAKAII
AAHYGKKPDY SYIAGCSNGG RHTMVAAERM PEQYDGFLVG NPGFNLPRAA VQHAWDVQAL
TKADADIRKS ITREDAKLIS SKIIEACDGL DGARDGLTAN LKACQKTFSF DSLRCVAGST
EACLPSAKVD ALKKVFAGPQ NSKGEALYSD WPVDGGVGTG NWRAWKVESP VAPWNNLPII
ATMGGASLNY IFSTPPVEVE GSPDKLVEKL QSYDFDKDAP KIFAKEGPFT ESAMEFMAPP
AVDNPTLPAF QGGARKMLIY HGQADPVFSV NDTIRWYEKL NANVAGKADG FARLFALPGE
THCGGGVTLE KFDALGALMD WVEKGKAPEA ITASVSAANK ELPAGWSPQR TRPLCPWPKF
AKYTGGDVEQ ASSFTCATE
|
|---|
| |