Gene BBta_5294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5294 
Symbol 
ID5149954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5523651 
End bp5524865 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content66% 
IMG OID640560058 
Producthypothetical protein 
Protein accessionYP_001241182 
Protein GI148256597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.479144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.193675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACA GTCGAGCTGC GTTGGCCGCA CGAAACCGCA GGAAGTCCTC CCTGACAGCG 
TTCTCTCACA AATTGATCGG TGGCGCGGCA ATCGCATGCC TGATCGGGGG CTGCGCTGTG
ACGGTCTACA CCAAGATCAT CGCGGCCGAT GCCTATCCGA CCTTGGGCAG TATCGAGCAG
GATGAGCCGG TCGTGCGTCC GGCGCCACGG CTGGCCACGC GCAGCGCGTC GGATGCCGTC
AGCGACGCGT TCTCCGCCTT CCCGCAATCG GCGCCGGTGA CCAGCGTCGC AGCGATCACT
CCGCAGATGT TCAACGACCG CTTTGGCGCG GCCGTGCCAC AGGGTGTCGC CTCCAATGCA
GCCGCTGGCG CGCCGCCGCT GCCGAAGTTC GCCGAGGCCG CCCCGCTTCA GCCTGAGACA
AAGCAAGCTG AGACAAAGCA AGCTGAGACA AAGCAAGCGG AGACCAAGCA GGCAGAGACG
AAGCCGGCCG AGCCCGCCAA GGTCGCCGAG GCCCCGAAGA AGGACGCCCG CCCGCCGATG
CGGCTGGCGC TCGCCAACAC CAATGCCAAG CCGACGGCTC AGCCGCAGGC CGCCACGCCT
GCCCAGGCAG CCGAGGCCAA TGGGCCAAAG GACGGCTTCT CGCTGCGGGC GATGACCGAG
CGCGCGAAGG CCGCGGTGCT GTCGATCGCC GGCGAGCGGC ATTCGATCCA GGAGAAGCTC
TGGGGCAAGC CGGAGACCCA GGATGGCGGT CTGCTGGCCT ATGCCTCGGC TGATTCCAAC
ATCACCGCGA CGATGGCCAA GGACCCCACC AGAGGCGGCC GTCCGCCTTA TGATCTGAGC
ACCGCGGTCT ATGACATCTC GGCCAAGGCG GTGTACCTGC CGGACGGCAC CAAGCTCGAG
GCGCATTCGG GCCTGGGCGA TAACCTCGAC AATCCGCACT CGGAAAAGAT CAAGATGCGC
GGCGTCACGC CGCCGCACAT CTATGAGCTC AAGCCGCGCG AGGCGCTGTT CCATGGCGTG
CCGGCGCTGC GGCTGAACCC GATCGGCGGC GAGGACGCCA TCCATGGCCG TAACGGCCTG
CTGGCGCATA CCTTCATGCT CGGACCGAAC GGTGACTCCA ACGGCTGCGT GTCGTTCCGC
GACTACTACG CCTTCCTCGA TGCCTACAAG AACAAGGGCA TCCGCAAGCT CGCCGTCCTC
GCCCGCATCG ACTGA
 
Protein sequence
MSNSRAALAA RNRRKSSLTA FSHKLIGGAA IACLIGGCAV TVYTKIIAAD AYPTLGSIEQ 
DEPVVRPAPR LATRSASDAV SDAFSAFPQS APVTSVAAIT PQMFNDRFGA AVPQGVASNA
AAGAPPLPKF AEAAPLQPET KQAETKQAET KQAETKQAET KPAEPAKVAE APKKDARPPM
RLALANTNAK PTAQPQAATP AQAAEANGPK DGFSLRAMTE RAKAAVLSIA GERHSIQEKL
WGKPETQDGG LLAYASADSN ITATMAKDPT RGGRPPYDLS TAVYDISAKA VYLPDGTKLE
AHSGLGDNLD NPHSEKIKMR GVTPPHIYEL KPREALFHGV PALRLNPIGG EDAIHGRNGL
LAHTFMLGPN GDSNGCVSFR DYYAFLDAYK NKGIRKLAVL ARID