Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5294 |
Symbol | |
ID | 5149954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5523651 |
End bp | 5524865 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640560058 |
Product | hypothetical protein |
Protein accession | YP_001241182 |
Protein GI | 148256597 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.479144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.193675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAACA GTCGAGCTGC GTTGGCCGCA CGAAACCGCA GGAAGTCCTC CCTGACAGCG TTCTCTCACA AATTGATCGG TGGCGCGGCA ATCGCATGCC TGATCGGGGG CTGCGCTGTG ACGGTCTACA CCAAGATCAT CGCGGCCGAT GCCTATCCGA CCTTGGGCAG TATCGAGCAG GATGAGCCGG TCGTGCGTCC GGCGCCACGG CTGGCCACGC GCAGCGCGTC GGATGCCGTC AGCGACGCGT TCTCCGCCTT CCCGCAATCG GCGCCGGTGA CCAGCGTCGC AGCGATCACT CCGCAGATGT TCAACGACCG CTTTGGCGCG GCCGTGCCAC AGGGTGTCGC CTCCAATGCA GCCGCTGGCG CGCCGCCGCT GCCGAAGTTC GCCGAGGCCG CCCCGCTTCA GCCTGAGACA AAGCAAGCTG AGACAAAGCA AGCTGAGACA AAGCAAGCGG AGACCAAGCA GGCAGAGACG AAGCCGGCCG AGCCCGCCAA GGTCGCCGAG GCCCCGAAGA AGGACGCCCG CCCGCCGATG CGGCTGGCGC TCGCCAACAC CAATGCCAAG CCGACGGCTC AGCCGCAGGC CGCCACGCCT GCCCAGGCAG CCGAGGCCAA TGGGCCAAAG GACGGCTTCT CGCTGCGGGC GATGACCGAG CGCGCGAAGG CCGCGGTGCT GTCGATCGCC GGCGAGCGGC ATTCGATCCA GGAGAAGCTC TGGGGCAAGC CGGAGACCCA GGATGGCGGT CTGCTGGCCT ATGCCTCGGC TGATTCCAAC ATCACCGCGA CGATGGCCAA GGACCCCACC AGAGGCGGCC GTCCGCCTTA TGATCTGAGC ACCGCGGTCT ATGACATCTC GGCCAAGGCG GTGTACCTGC CGGACGGCAC CAAGCTCGAG GCGCATTCGG GCCTGGGCGA TAACCTCGAC AATCCGCACT CGGAAAAGAT CAAGATGCGC GGCGTCACGC CGCCGCACAT CTATGAGCTC AAGCCGCGCG AGGCGCTGTT CCATGGCGTG CCGGCGCTGC GGCTGAACCC GATCGGCGGC GAGGACGCCA TCCATGGCCG TAACGGCCTG CTGGCGCATA CCTTCATGCT CGGACCGAAC GGTGACTCCA ACGGCTGCGT GTCGTTCCGC GACTACTACG CCTTCCTCGA TGCCTACAAG AACAAGGGCA TCCGCAAGCT CGCCGTCCTC GCCCGCATCG ACTGA
|
Protein sequence | MSNSRAALAA RNRRKSSLTA FSHKLIGGAA IACLIGGCAV TVYTKIIAAD AYPTLGSIEQ DEPVVRPAPR LATRSASDAV SDAFSAFPQS APVTSVAAIT PQMFNDRFGA AVPQGVASNA AAGAPPLPKF AEAAPLQPET KQAETKQAET KQAETKQAET KPAEPAKVAE APKKDARPPM RLALANTNAK PTAQPQAATP AQAAEANGPK DGFSLRAMTE RAKAAVLSIA GERHSIQEKL WGKPETQDGG LLAYASADSN ITATMAKDPT RGGRPPYDLS TAVYDISAKA VYLPDGTKLE AHSGLGDNLD NPHSEKIKMR GVTPPHIYEL KPREALFHGV PALRLNPIGG EDAIHGRNGL LAHTFMLGPN GDSNGCVSFR DYYAFLDAYK NKGIRKLAVL ARID
|
| |