Gene BBta_5288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5288 
Symbol 
ID5149966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5518791 
End bp5519387 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content73% 
IMG OID640560054 
Producthypothetical protein 
Protein accessionYP_001241178 
Protein GI148256593 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.202745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCAAGACCCT GCTCGAGCTC GCCGGCGCCG ACCTCAGCCT GCCGTCCCTC 
GCCGAGTCCT GCCTCGTGCT GATCGATATC CAGAACGAGT ACCGCGACGG GCCGCTCGCC
CTGCCCGGCG CCGAGCCCGC GATCGCCTGC GCGGCGCGGC TGCTGGCCCG CGCAAGGGCG
GCCGGCGCGC AGGTGTTTCA TATCGCCCAT CAGGGCCGCG AGGGCGGCCT GTTCGACCGC
ACCGCCCCGC GCGGCGCGAT CGTCGATGCG CTGGCGCCGC GCGCCGACGA GCCGGTCATC
GAGAAGACGC TGCCGAATGC GTTTGCCGGC ACTGATCTGT CGGCGCGGCT GTCCGCCTCG
GGCCGCAAGA ACCTGCTGCT CGCCGGTTTC ATGACGCATA TGTGCGTGTC GTCGACCGCG
CGCGCCGCAC TCGATCTCGG CTACCGCGTC ACCATCGACG CCGACAGCTG CGCGACGCGG
GATCTGCCCG ACGGCCGCGG CGGCATGCTT GCGGCCGCCC TGGTGCACGA CGTCGCGCTG
GCCGAGCTGT CCGACCGCTT TGCCATCATC GCCCGCGACA GCACGGCCCT GGCGTAG
 
Protein sequence
MTAPKTLLEL AGADLSLPSL AESCLVLIDI QNEYRDGPLA LPGAEPAIAC AARLLARARA 
AGAQVFHIAH QGREGGLFDR TAPRGAIVDA LAPRADEPVI EKTLPNAFAG TDLSARLSAS
GRKNLLLAGF MTHMCVSSTA RAALDLGYRV TIDADSCATR DLPDGRGGML AAALVHDVAL
AELSDRFAII ARDSTALA