| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5285 |
|---|
| Symbol | groEL |
|---|
| ID | 5149964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5515893 |
|---|
| End bp | 5517533 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640560052 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_001241176 |
|---|
| Protein GI | 148256591 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.928272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.361226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCGA AAGACGTAAA GTTCGGCGTC GAAGCCCGCG ACCGCATGCT GCGCGGCGTG
GACATTCTCG CCAATGCCGT GAAGGTCACG CTCGGTCCGA AGGGCCGCAA CGTCGTCCTC
GACAAGTCGT TCGGCGCGCC GCGCATCACC AAGGACGGCG TCACCGTCGC CAAGGAGATC
GAGCTCGACG ACAAGTTCGA GAACATGGGC GCACAGATGG TGCGCGAGGT CGCCTCGAAG
TCCGCTGACG CGGCCGGCGA CGGCACCACC ACCGCGACCG TGCTGGCCCA GGCCATCGTC
CGCGAGGGCG CCAAGGCCGT TGCCGCCGGC ATGAACCCGA TGGATCTGAA GCGCGGCATC
GACCTCGCGG TCGAGGCGGT CGTGGCCGAC CTCGTCAAGA ACTCGAAGAA GGTCACGTCG
AACGACGAGA TCGCCCAGGT CGGCACCATC TCCGCCAACG GCGACTCCGA GATCGGCAAG
TTCCTCGCCG ACGCCATGAA GAAGGTCGGC AATGAGGGCG TGATCACGGT CGAGGAAGCC
AAGTCGCTCG AGACCGAGCT CGACGTCGTC GAGGGCATGC AGTTCGATCG CGGCTACATC
TCGCCCTACT TCGTCACCAA CGCCGACAAG ATGCGCGTTG AGATGGACGA CGCCTACATC
CTCATCAACG AAAAGAAGCT GTCGTCGCTG AACGAACTGC TGCCGCTGCT CGAGGCCGTG
GTGCAGACCG GCAAGCCGCT GGTGATCGTC GCTGAGGACG TCGAGGGCGA GGCTCTGGCC
ACGCTCGTCG TCAACCGCCT GCGTGGCGGC CTGAAGGTCG CGGCCGTCAA GGCTCCGGGC
TTCGGCGATC GCCGCAAGGC CATGCTGCAG GACATCGCGA TCCTGACCGG CGGCCAGGCG
ATCTCGGAAG ACCTCGGCAT CAAGCTCGAG AACGTCAACC TCTCGATGCT CGGCCGTGCC
AAGAAGGTGA TGATCGACAA GGAGAACACC ACGATCGTCA ACGGCGCCGG CAAGAAGGCC
GACATCGAGG CGCGCGTGGC CCAGATCAAG GCGCAGATCG AGGAGACCAC CTCGGACTAC
GACCGTGAGA AGCTGCAAGA GCGTCTCGCC AAGCTCGCCG GCGGCGTCGC GGTGATCCGC
GTCGGCGGCG CGACCGAGGT CGAGGTCAAG GAGCGCAAGG ATCGCGTGGA TGACGCGATG
CATGCGACCC GCGCGGCTGT CGAGGAAGGC ATCCTGCCGG GCGGCGGCGT CGCCCTGCTC
CGTGCTTCCG AGCAGCTCAA GGGCCTGCGC ACCAAGAACG AGGACCAGAA GACCGGTGTC
GAGATCGTCC GCAAGGCGCT CTCCGCTCCG GCCCGCCAGA TCGCGATCAA CGCGGGCGAG
GACGGTTCGG TCATCGTCGG CAAGATCCTC GAGAAGGAGC AGTATGCGTA CGGCTTCGAC
TCGCAGACCG GTGACTACGT GAACATGGTG TCCAAGGGCA TCATCGACCC GACCAAGGTC
GTGCGCACCG CGATCCAGAA CGCCGCCTCC GTGGCGAGCC TCTTGATCAC CACCGAGGCG
ATGGTCGCCG AGCTGCCGAA GAAGAACGCT GGCGGCCCCG CGATGCCTCC GGGCGGCGGC
ATGGGCGGCA TGGACTTCTA A
|
|---|
| Protein sequence | MSAKDVKFGV EARDRMLRGV DILANAVKVT LGPKGRNVVL DKSFGAPRIT KDGVTVAKEI
ELDDKFENMG AQMVREVASK SADAAGDGTT TATVLAQAIV REGAKAVAAG MNPMDLKRGI
DLAVEAVVAD LVKNSKKVTS NDEIAQVGTI SANGDSEIGK FLADAMKKVG NEGVITVEEA
KSLETELDVV EGMQFDRGYI SPYFVTNADK MRVEMDDAYI LINEKKLSSL NELLPLLEAV
VQTGKPLVIV AEDVEGEALA TLVVNRLRGG LKVAAVKAPG FGDRRKAMLQ DIAILTGGQA
ISEDLGIKLE NVNLSMLGRA KKVMIDKENT TIVNGAGKKA DIEARVAQIK AQIEETTSDY
DREKLQERLA KLAGGVAVIR VGGATEVEVK ERKDRVDDAM HATRAAVEEG ILPGGGVALL
RASEQLKGLR TKNEDQKTGV EIVRKALSAP ARQIAINAGE DGSVIVGKIL EKEQYAYGFD
SQTGDYVNMV SKGIIDPTKV VRTAIQNAAS VASLLITTEA MVAELPKKNA GGPAMPPGGG
MGGMDF
|
|---|
| |