| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5254 |
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| Symbol | |
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| ID | 5154632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5478753 |
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| End bp | 5480366 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560023 |
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| Product | putative ABC transporter (substrate-binding protein) |
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| Protein accession | YP_001241147 |
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| Protein GI | 148256562 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.534405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0632497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCACA TCCCGCGCTG GAAAGGTCTT ACGCTCGCCA CGAGCCTGGC CGTTTCCGTG
CTTTCGCTGT CCACGGCGCT GAGCACCCAG GCGCTTGCCG CCGCCAAGAA GACGATCACG
GCGGTGATGC ATTCCGACCT GCGCGTGATC GATCCCGGCT TCACCACCGC CTATATCACC
CGCGACCATG GCTACATGGT CTACGACACG TTGCTGGCGG TCGATTCGAA CTTCAAGATT
CAGCCGCAGA TGGCGGACTG GAAGGTCTCC GACGACAAGC TGACCTACAC CTTCACCCTG
CGCGATGGCT TGAAATGGCA TGACGGCACG CCGGTCACGG CGGAGGATTG CGTCGCCTCG
CTGAAGCGCT GGGGCCGCAA TGACGGCATG GGCCAGAAGC TGATGGACTT CACCGCGAGC
CTGGAAGCTC CGGACGCCAA GACCATCGTG CTGAAGCTGA AGGAGCCTTA TGGCCTGGTA
CTGGAGTCGA TCGGCAAGCC GTCGTCGCTG GTGCCGTTCA TGATGCCGAA GCGCCTCGCC
GAGACGCCGC AGGGCCAGCA GATCCCGGAG CAGATCGGCT CCGGCCCGTT CAAATTCGTC
AAGGCGGAAT TTCAGCCGGG CGTGAAGGCG GTCTACGAGA AGAACACCGA CTACGTGCCG
CGCAAGGAGC CGGCGAGCTG GACCTCCGGC GGCAAGGTGG TGAAGGTCGA CCGCGTCGAA
TGGATCACGA TGCCGGATGC GCAGACCGCG GTGAACGCGC TGCAGTCGGG CGACATCGAC
TTCATGGAGA ACCTTCCCTA CGACATGATG CCGGTGCTGG AAGCGAACCC GGATCTGAAG
ATCGATGTGC TGAACAAGTT CGGCTACCAG ACGCTGGGAC GGATGAACTT CCTCAATCCG
CCGTTCGACA ATGTGAAGGT GCGCCGCGCG GCGTTCCTGG CGCTGAACCA GAAGGACGTG
CTCGACGCGC TGGTCGGCAA TGCCAAATAT CAGAAGATCT GCGGCGCGGT GTTCGTCTGC
GGCACGCCGC TGGAGACCGA TGTCGGTGCG GAGACGCTGA TCAAGGGCAA CGGCATGGCC
GAGGCCAAGA AGGCGCTGGC CGAATCCGGC TATGACGGCA CGCCGATCGC GATCATGGCG
CCCGGCGACG TCACGACGTT GAAGGCGCAG CCGATCGTGG CCGCACAGCT CTTGCGCGAG
GCCGGCTTCA AGGTCGACCT GCAGGCGACG GATTGGCAGA CCGTGGTGAC GCGCCGCGCC
AGCCAGAAGC CGGTCAAGGA AGGCGGCTGG AACATGTTCT TCACCAACTG GGTCGGCGCC
GACGTCGCCA ATCCCGTGGT GAACGTGTCG ATCGGTGGCC GCGGCACCAA GGGCGGCTGG
TTCGGCTGGG CCGAGGATGC CGAGATCGAG AAGCTGCGCG ACGCCTATGC GCGCGCGTCT
TCGCCGGACG AGCAGAAGAA GATCGCGACC GAGATCCAGA AGCTGAACTA TGAGCGTGTG
ATCTACATCC CGCTCGGCCA ATATCTGCTG CCGAGCGGCT GGCGCAAATC GCTGACCGGC
GTGCTGGACG GCCCGGCGAC GCCGATCTTC TGGAACATCG ACAAGAGCGA GTAG
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| Protein sequence | MFHIPRWKGL TLATSLAVSV LSLSTALSTQ ALAAAKKTIT AVMHSDLRVI DPGFTTAYIT
RDHGYMVYDT LLAVDSNFKI QPQMADWKVS DDKLTYTFTL RDGLKWHDGT PVTAEDCVAS
LKRWGRNDGM GQKLMDFTAS LEAPDAKTIV LKLKEPYGLV LESIGKPSSL VPFMMPKRLA
ETPQGQQIPE QIGSGPFKFV KAEFQPGVKA VYEKNTDYVP RKEPASWTSG GKVVKVDRVE
WITMPDAQTA VNALQSGDID FMENLPYDMM PVLEANPDLK IDVLNKFGYQ TLGRMNFLNP
PFDNVKVRRA AFLALNQKDV LDALVGNAKY QKICGAVFVC GTPLETDVGA ETLIKGNGMA
EAKKALAESG YDGTPIAIMA PGDVTTLKAQ PIVAAQLLRE AGFKVDLQAT DWQTVVTRRA
SQKPVKEGGW NMFFTNWVGA DVANPVVNVS IGGRGTKGGW FGWAEDAEIE KLRDAYARAS
SPDEQKKIAT EIQKLNYERV IYIPLGQYLL PSGWRKSLTG VLDGPATPIF WNIDKSE
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