| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5243 |
|---|
| Symbol | |
|---|
| ID | 5154795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5466696 |
|---|
| End bp | 5467388 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640560013 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001241137 |
|---|
| Protein GI | 148256552 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.463835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.143638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTTGAAG TGTCCGGGCT GAACGTCTTT CACGGTGATC TCCAGGCCAT CTTCGATCTT
GACCTTCGCG TCGGCGAAGG TGAGGTGGTT GCGCTTGTCG GTGCGAATGG CGCCGGCAAG
ACAACGATGA TGCGCGCGCT TGTCGGCCTG ATTGCCAGCA AGCAGGGACG AATCCGCTTC
GATGGCGCCG AGATTTCCGC TGCATCCGCG GAGGACATCG CGCGCGCAGG ACTCTGCATG
GTGCCCGAAG GGCGCATGTT GTTCGACAGC CTCACCGTGT TGGAAAATCT GATGATGGGG
CAGGTGCTCA GGCGCCGCGG GTATTGGACC TTGGAGCGGG TCTTCGAACT GTTTCCGATC
CTGGCCGAGC GGCGTAGCGC GATGCCGCGT CACCTCTCGG GCGGCCAGCA ACAGATGGTC
GCGATCGGCA GGGCGCTGAT CTGCAACCCG CGGCTCCTGC TGTGTGATGA GATTTCGCTC
GGGTTGGCAC CGCTCATGGT CGAGCAGATT TATGCGGCAT TCGCGCAGAT CGGCAAGCAG
GGCACGGCCC TTGTGCTGGT CGAGCAGGAT GTGAAGCGCG CCTCCGCCGC CGCTGACAGG
CTTTATTGCC TGCTCAAGGG CAGGATTTCG CTGGAGACCG CCGCAGGTGC CGTGAGGGTC
GAGGATCTGA CACGCGCCTA TTTCGGCGCT TGA
|
|---|
| Protein sequence | MLEVSGLNVF HGDLQAIFDL DLRVGEGEVV ALVGANGAGK TTMMRALVGL IASKQGRIRF
DGAEISAASA EDIARAGLCM VPEGRMLFDS LTVLENLMMG QVLRRRGYWT LERVFELFPI
LAERRSAMPR HLSGGQQQMV AIGRALICNP RLLLCDEISL GLAPLMVEQI YAAFAQIGKQ
GTALVLVEQD VKRASAAADR LYCLLKGRIS LETAAGAVRV EDLTRAYFGA
|
|---|
| |