Gene BBta_5235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5235 
Symbol 
ID5154411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5459321 
End bp5460472 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content70% 
IMG OID640560005 
Producthypothetical protein 
Protein accessionYP_001241130 
Protein GI148256545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.250261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCGA ATCGAATCAA TCGCGGTATC GGTCTGGCCG TGGCGGGCCT TGCCATCAGC 
ATCGCCATCG GCGCGGCGCT GTATCCGCAT GCCTATCATG CCGGAGCCGT GCTCGACGCG
GCAGACGATC CGGCGCGGCT GTCGGAGCTG CAGATCGCGC CGCTATTGCA AAGCGATCCG
ACGCGCATCT CCACCGGTAT CGAGGAGGCG CTTGCCGCCG GCGATCCCGA TCTCGCCGAC
AGCTTCGTGG CACTCGCAAA CGCTCATCAT CTCGCCCTCG ATGAGAGTCA GGTGCAGCGG
GTGACCGAAG CCTTGGCTGC GGAGAAGGCG CCGGCGAGCG TGGCGAAGCG CTTTGCGACC
GGGCTCGTTA CCGGTCAGGC CGATGATGTC GCCAGCCTCT CCGGCACTGT CGCCGGCGAT
CTGTTCGTGT TCGGTGACAT CCGCGACGCC GTGCGCGAAG GCAAGCATCT GGTGATGGGC
GAGGAGACCG ACCGCCTCGT GCTGGGCCTT GCCGCGGCTG GCCTTGCCGT GACCGCCGCG
ACCTATGTCT CCGCCGGCAC CGCGGCGCCG GTGCGCGCCG GTCTGACCCT GGTGAAGGAT
GCCCGCAAGG TCGGCCGGCT CGGCGAGGGA CTGGCGGCCT GGGCCGGACG GTCCGCGCGC
GAGGTGGTCG ATGCGCCGAT GCTGCAGCAG GCGGTCGCCT CCGGCTCGGT GCTGCGTCCC
GGAGAGACCG CGACCGCGAT CAGGGCGGCG TTCCGGGCCG AGAAGGCCGG TGCCCTGGTG
CGGCTCGGCA AGGATGTCGG CCGCATCACC GAGAAGGCCG GAACGCGAGG CGCGCTCGAT
TCGCTCAAGC TCGCGGAGGG GCCGAAGGAC GTTGCCCGTG CGGCCCGTCT GGCCGAGGCC
AAGGGCGGCC AGACGCGCGC GATCCTCAAA CTGCTCGGCC GCGGCGCGCT GCTGCTGACG
GCGGGCGCGT TCAACCTCGC GCTCTGGCTG TTCGGTGCAC TGATGACGCT GTTCGGGATG
CTCGGCTCGC TCAAATCGAT AACAGAGCGC GCCACCCAGT CCGCGATCGA TCGCGGCAAG
CGGCGGCGAT TGCGGCAGGC GCAGGCCGCT GCGGCCAGAC CCGAACTGGT CGCCGCCGCC
TCCTGCGGCT AA
 
Protein sequence
MISNRINRGI GLAVAGLAIS IAIGAALYPH AYHAGAVLDA ADDPARLSEL QIAPLLQSDP 
TRISTGIEEA LAAGDPDLAD SFVALANAHH LALDESQVQR VTEALAAEKA PASVAKRFAT
GLVTGQADDV ASLSGTVAGD LFVFGDIRDA VREGKHLVMG EETDRLVLGL AAAGLAVTAA
TYVSAGTAAP VRAGLTLVKD ARKVGRLGEG LAAWAGRSAR EVVDAPMLQQ AVASGSVLRP
GETATAIRAA FRAEKAGALV RLGKDVGRIT EKAGTRGALD SLKLAEGPKD VARAARLAEA
KGGQTRAILK LLGRGALLLT AGAFNLALWL FGALMTLFGM LGSLKSITER ATQSAIDRGK
RRRLRQAQAA AARPELVAAA SCG