Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5235 |
Symbol | |
ID | 5154411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5459321 |
End bp | 5460472 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640560005 |
Product | hypothetical protein |
Protein accession | YP_001241130 |
Protein GI | 148256545 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.250261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCTCGA ATCGAATCAA TCGCGGTATC GGTCTGGCCG TGGCGGGCCT TGCCATCAGC ATCGCCATCG GCGCGGCGCT GTATCCGCAT GCCTATCATG CCGGAGCCGT GCTCGACGCG GCAGACGATC CGGCGCGGCT GTCGGAGCTG CAGATCGCGC CGCTATTGCA AAGCGATCCG ACGCGCATCT CCACCGGTAT CGAGGAGGCG CTTGCCGCCG GCGATCCCGA TCTCGCCGAC AGCTTCGTGG CACTCGCAAA CGCTCATCAT CTCGCCCTCG ATGAGAGTCA GGTGCAGCGG GTGACCGAAG CCTTGGCTGC GGAGAAGGCG CCGGCGAGCG TGGCGAAGCG CTTTGCGACC GGGCTCGTTA CCGGTCAGGC CGATGATGTC GCCAGCCTCT CCGGCACTGT CGCCGGCGAT CTGTTCGTGT TCGGTGACAT CCGCGACGCC GTGCGCGAAG GCAAGCATCT GGTGATGGGC GAGGAGACCG ACCGCCTCGT GCTGGGCCTT GCCGCGGCTG GCCTTGCCGT GACCGCCGCG ACCTATGTCT CCGCCGGCAC CGCGGCGCCG GTGCGCGCCG GTCTGACCCT GGTGAAGGAT GCCCGCAAGG TCGGCCGGCT CGGCGAGGGA CTGGCGGCCT GGGCCGGACG GTCCGCGCGC GAGGTGGTCG ATGCGCCGAT GCTGCAGCAG GCGGTCGCCT CCGGCTCGGT GCTGCGTCCC GGAGAGACCG CGACCGCGAT CAGGGCGGCG TTCCGGGCCG AGAAGGCCGG TGCCCTGGTG CGGCTCGGCA AGGATGTCGG CCGCATCACC GAGAAGGCCG GAACGCGAGG CGCGCTCGAT TCGCTCAAGC TCGCGGAGGG GCCGAAGGAC GTTGCCCGTG CGGCCCGTCT GGCCGAGGCC AAGGGCGGCC AGACGCGCGC GATCCTCAAA CTGCTCGGCC GCGGCGCGCT GCTGCTGACG GCGGGCGCGT TCAACCTCGC GCTCTGGCTG TTCGGTGCAC TGATGACGCT GTTCGGGATG CTCGGCTCGC TCAAATCGAT AACAGAGCGC GCCACCCAGT CCGCGATCGA TCGCGGCAAG CGGCGGCGAT TGCGGCAGGC GCAGGCCGCT GCGGCCAGAC CCGAACTGGT CGCCGCCGCC TCCTGCGGCT AA
|
Protein sequence | MISNRINRGI GLAVAGLAIS IAIGAALYPH AYHAGAVLDA ADDPARLSEL QIAPLLQSDP TRISTGIEEA LAAGDPDLAD SFVALANAHH LALDESQVQR VTEALAAEKA PASVAKRFAT GLVTGQADDV ASLSGTVAGD LFVFGDIRDA VREGKHLVMG EETDRLVLGL AAAGLAVTAA TYVSAGTAAP VRAGLTLVKD ARKVGRLGEG LAAWAGRSAR EVVDAPMLQQ AVASGSVLRP GETATAIRAA FRAEKAGALV RLGKDVGRIT EKAGTRGALD SLKLAEGPKD VARAARLAEA KGGQTRAILK LLGRGALLLT AGAFNLALWL FGALMTLFGM LGSLKSITER ATQSAIDRGK RRRLRQAQAA AARPELVAAA SCG
|
| |