Gene BBta_5221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5221 
Symbol 
ID5155140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5450523 
End bp5451335 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID640559993 
Productputative carboxymethylenebutenolidase precursor (dienelactone hydrolase 
Protein accessionYP_001241118 
Protein GI148256533 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0554108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.200336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCT CTGCGGCCGT CACCGCGGGC TACACGCTGG CCGCCGGTCC GGTCAGGGCG 
GAGGTCATCA CCACCGATAC CAACGGCCTC AACGCTGGCG ACGCCAAGAT CAAGGTTGCC
GACGGCGAGA TGCCGGCCTA TTTCGCCAGG CCCGCCAGCG CCAGCAATCC TCCGGTCATC
CTGGTCGCGA TGGAGATCTT CGGCCTGCAC CAATACATCA AGGACGTCAC CCGCCGCCTG
GCCAAGCTCG GCGCGCTCGC GGTCGCACCC GACTATTATT TCCGCAAGGG CACCGACCTG
ACCAAGATCG CCGACATCAA AGAATTGCTG CCGATCGTGA ATGCAAAACC GGATGCCGAG
CTGCTGACGG ATCTCGACGC GACGGTGGCC TGGGCGAAGT CACAGGGCGG CGACACCTCG
CGGCTCGGCA TCGTCGGCTT CTGCCGCGGC GGCCGGAATG TTTGGGAATA TGCAGCCCAC
AATGCCGGGC TGAAGGCCGC CGTCGCGTTC TACGGTCCGC TGACCGATGC GCCCAACCCG
CTCTGGCCGA AGAACCCGAC GCAGCTCGCC CCCGAGATGA AGGCGCCCGT GCTCGGTCTT
TACGGCGAAG CCGACACCGG CATTCCCGTG GCCAGCGTGG AGGCGATGAA GGCGGCGCTT
GCGGAGAACA AGAAGACCGC CGAGTTCAAG ATTTATCCTG GCGCGCCGCA TGGCTTCCAT
GCCGATTACC GCCCGAGCTA TCGCAAGGAC GCCGCGGAGG ATGCCTGGGC CCAGATGCAG
GCCTGGTTCA AGAAGTACGG CGTTCTGAGC TGA
 
Protein sequence
MTASAAVTAG YTLAAGPVRA EVITTDTNGL NAGDAKIKVA DGEMPAYFAR PASASNPPVI 
LVAMEIFGLH QYIKDVTRRL AKLGALAVAP DYYFRKGTDL TKIADIKELL PIVNAKPDAE
LLTDLDATVA WAKSQGGDTS RLGIVGFCRG GRNVWEYAAH NAGLKAAVAF YGPLTDAPNP
LWPKNPTQLA PEMKAPVLGL YGEADTGIPV ASVEAMKAAL AENKKTAEFK IYPGAPHGFH
ADYRPSYRKD AAEDAWAQMQ AWFKKYGVLS