Gene BBta_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5216 
Symbol 
ID5155345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5446051 
End bp5446608 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID640559988 
Producthypothetical protein 
Protein accessionYP_001241113 
Protein GI148256528 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.897887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.15918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATC CGTCCAATCG CGAGTTCTTC GCCTATTGGA ACGATCGGCG CGGCCATGCC 
AAGGCGCCGG AGCGCGGCGA CTTCGAACCC GCTGCCGTGC GCGAACTGCT CGGCGACAGC
TTTGTCCTGT CCTGCGATGC CGACAGCGGC TTTCCGTTCC GCATGGCCGG CACCCGGCTG
TGCGCCCTGC TCGGCGGCGA TGTGAAGGAC AAGAGCTTTC CGGCGCATTT CGCGCCGGCG
AGCCGCCGCG AGATCGAGGA GATCACGACC GTCGTCTGCG AGGAGACGCT GCCCGCCATT
GCGGGCGTGA CCGCACAGGC CCCCGATCGT ACGACCGCCC ACTTCGAGCT GCTGCTGCTG
CCATTCGCCA CGCGGGCGCA TGAACCGATC AGCCTGACCG GCCTGCTCGC GCCGTTCGAA
ACGCCGCAAG GCGCGCTCGG ACCGCTGGAG ATCGCGTCCT GGCGTTACCT CCATGTGCCA
ACCGAGCCGA TCGTGCCGCG CGCGCTGCGC AAGCTCGCCC TCGCCCGCGG CCTGATGGTC
TATGAAGGGC TGCGCTGA
 
Protein sequence
MKHPSNREFF AYWNDRRGHA KAPERGDFEP AAVRELLGDS FVLSCDADSG FPFRMAGTRL 
CALLGGDVKD KSFPAHFAPA SRREIEEITT VVCEETLPAI AGVTAQAPDR TTAHFELLLL
PFATRAHEPI SLTGLLAPFE TPQGALGPLE IASWRYLHVP TEPIVPRALR KLALARGLMV
YEGLR