| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5207 |
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| Symbol | |
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| ID | 5155568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5435956 |
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| End bp | 5438424 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640559980 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001241105 |
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| Protein GI | 148256520 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.097356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG CCAAGACGAT GTCAGAAAAG ATCAGCAACG ATCTCTTCGA CGATATCCCG
GTGCTCAAGC GCAAATGGCA GGCGGCGTTG AAGCCGGGCC AGACATTGCC GCGCTATGAG
GACGTGATGC TCGGCAGCCT CGGTCGTCTC GCCGATCACA TCGCGGTGTT GAAGAATGAC
GGTGGCGTGC TGGAGATCTC GCGCAGCGGC CGTTATGTCC AGCATTGGCT GCAGGACGAG
CGATGGGACA TCGCCGTCGC AGCCGTGTCG CCGGATTGCG CCACGGTGCT GACGGAGGCG
GCGAGCTCCG CGCTGTCGAG CCGGCAGCCG CATGCGGCGA CGGCGCATTG CGTGCGCGAT
GGCATGGTTC GCACCTATGA TGTGCTGGCG CTGCCGACCA GCTCGCGCTG GGGCAGCACG
CTGGTGGGGA CCTATATCAA CGAGCGCTCC GCGCAATATA ATCTGCTCGA TGCGATCTTC
TCGACGACGG ACGACGGGGT GATCTCGCTT GCGACCATCC GCGACAGCGC CGGTGCGCCG
CGCGATTTCC AGGTTGTGCA TCACAATCGC GCGGCGGCCG AGCTGCTCAG GCTGCCGTCG
AGCGACCTGC AATGGCACCG CCTGAAGCAG GGCGGCCATG TGCTGTGCGG CCCGGACGTG
ATGGCGCGGC TGTTCGAGGT CGTGGCGCAT GGTGGAAGTG ACCAGTTCGA GCTCGACAGC
GACGACCGCA ATCTCCGGCT TGGCGTCCAT GCGTTCGGTG ACATCGTCTC GATGACCATT
GCCGACGTGA CCGCGCTCAA ACGGCGTGAG GCCTCGTTCC GGCTGCTGTT CGACGCCAAT
CCGATGCCGA TGTGCATCCT CGACGGGAAG ACTGCGCAGA TCCTCAACGT CAACGATGCG
ATGCTCCGGC ATTATGGTTA CAGCCGCGCG GATCTCCTGT GCATGAACGT GTGGGATCTG
TGGCCGCCGG GCGAGTGGGG CGCGGTCGAC GATGCATTGA CGCGGCTGGC CGATGGCGAT
CTGTTTCACC GCGACTGCCG CCACTGCAAA GCCGATGGAA GCGAGATCGA GGTCCTGACC
TACGGACGCG AGATCAATTA CGACGGCCGC GACGGCGTGC TGATGGCCAT CGTCGACATT
ACCGAGCGCC GTCGCGCCGA GGCGCGGATT GCCTATATGG CGCATCATGA CGGTCTCACC
GGCCTGCCGA ACCGGGAGTT TTTCCAGCAG CGCCTGGCGC AGGAGCTCGA TGAAGCCGCG
TCAGGGGCGA GGCCACTCGC CGTATTGTGC ATCGACCTCG ACCTGTTCAA GACCGTCAAC
GACTCGTTCG GCCATCCGAT GGGCGATCGT CTGCTGCAGG CGGTCGCCGG CCGCCTCAAG
CAGCAGATGC ACGGCGGCAA TCTGGCGGCG CGGCTCGGCG GCGACGAGTT CGCCGCGATC
GTCAGCCAGG ACGGCGCTGA TGGGTCCGGC GAGTTCGCGG CCCGCCTGAT CTCGGTGCTC
AGCGCGCCCT ATGACATCGA CGGCAATGAG CTCGTCATCG GGGCCTCGAT CGGCATCGCA
TTGTCTCCGC TCGACGGCAC GAGCTGCGAA GAGCTGATGA AGAATGCCGA CATGGCGTTG
TACCGCGCCA AACAGCACGG CGGCCGCGTG CACCGCTTTT TCGAGCGGGA GATGGATCTG
CAGGCGCAGA AGCGGCGCGA CATGGAGCAC GATCTGCGCC GCGCCTTTGC GCAAGCCGAG
TTCGAGCTGC ACTACCAGCC GCTCATCGAT GTCGCCAGCA ATATCATCAG CGGATTCGAA
TGCCTGCTGC GCTGGCGCCA TCCGGACAAG GGCATGATCT CGCCGGCGGA GTTCATTCCT
GTTGCCGAGG ACATCGGGCT GATCGTCCCG CTCGGCGAAT GGGTGTTGCG CGAGGCCTGC
CACGAGGCGG CGACATGGCC CGATGGCATC AAGGTCGCGG TGAACCTGTC GGCGGTGCAG
TTCCGCAGCC GCAACCTGGT GCAGGTCGTG ATGCAGGCGC TGGCGCAATC CAGCCTCGCC
CCGGAGCGGC TCGAGCTGGA AATCACGGAG TCGATCCTGC TCGCCGAGAC CGATGCCAAT
CTGGCGACCT TGCATCAGCT GCGCCAGCTT GGCGTCCGCA TATCGATGGA CGATTTCGGC
ACCGGCTATT CCAGCCTCAG CTATCTCAGA AGCTTCCCGT TCGACAAGAT CAAGATCGAT
CGTTCCTTCG TGAAGGACCT GGCGCAACGC TCCGACTGCC TGGCGATCGT CCGCGCCATT
TCCGGCCTGG GCCGCAGCCT GAACATCATC ACCACGGCCG AAGGCGTCGA GACATCAGAG
CAGCTCGACT GGCTGCGCGC CGAAGGCTGC AATCAGGTGC AGGGCTATCT GTTCAGCGCT
GCCAGGCCTG CCGCGGAGAT TGCAGGTCTG TTGGCGCGGT TCGGCGCACG ATCATCGAAG
GCGGCGTGA
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| Protein sequence | MSAAKTMSEK ISNDLFDDIP VLKRKWQAAL KPGQTLPRYE DVMLGSLGRL ADHIAVLKND
GGVLEISRSG RYVQHWLQDE RWDIAVAAVS PDCATVLTEA ASSALSSRQP HAATAHCVRD
GMVRTYDVLA LPTSSRWGST LVGTYINERS AQYNLLDAIF STTDDGVISL ATIRDSAGAP
RDFQVVHHNR AAAELLRLPS SDLQWHRLKQ GGHVLCGPDV MARLFEVVAH GGSDQFELDS
DDRNLRLGVH AFGDIVSMTI ADVTALKRRE ASFRLLFDAN PMPMCILDGK TAQILNVNDA
MLRHYGYSRA DLLCMNVWDL WPPGEWGAVD DALTRLADGD LFHRDCRHCK ADGSEIEVLT
YGREINYDGR DGVLMAIVDI TERRRAEARI AYMAHHDGLT GLPNREFFQQ RLAQELDEAA
SGARPLAVLC IDLDLFKTVN DSFGHPMGDR LLQAVAGRLK QQMHGGNLAA RLGGDEFAAI
VSQDGADGSG EFAARLISVL SAPYDIDGNE LVIGASIGIA LSPLDGTSCE ELMKNADMAL
YRAKQHGGRV HRFFEREMDL QAQKRRDMEH DLRRAFAQAE FELHYQPLID VASNIISGFE
CLLRWRHPDK GMISPAEFIP VAEDIGLIVP LGEWVLREAC HEAATWPDGI KVAVNLSAVQ
FRSRNLVQVV MQALAQSSLA PERLELEITE SILLAETDAN LATLHQLRQL GVRISMDDFG
TGYSSLSYLR SFPFDKIKID RSFVKDLAQR SDCLAIVRAI SGLGRSLNII TTAEGVETSE
QLDWLRAEGC NQVQGYLFSA ARPAAEIAGL LARFGARSSK AA
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