Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5204 |
Symbol | thrS |
ID | 5154998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5431856 |
End bp | 5433922 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640559977 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001241102 |
Protein GI | 148256517 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.144339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACT CGAAATCCCC CGATTCGAAA TCCGACCATT CCAAATCCGG CTTCCAGTAC AGCCTCAGCA ATCTGAAGCC CGCCGCCCCG GTCGAGAAGA TCACGATCGC CTTCCCCGAC GGGGCCAAGC GCGAATATCC GCGGGGCACC ACCGGCCTCG ATATTGCCAA GGGCATCTCG CCCTCGCTCG CCAAGCGCAC CGTCGCGATG GCGCTGAACG GCGACCTCGC CGACCTCAAC GACCCCATCA CCGAGGATGC CAAGCTCGAG CTCGTCGACC GCGACGATCC GCGCGCGTTG GAATTGATCC GGCACGATTG CGCCCATGTG CTCGCCGAGG CCGTGCAGTC GCTGTGGCCG GGAACCCAGG TGACGATCGG CCCTGTCATC GAGAACGGGT TCTATTACGA CTTCTTCCGC AACGAGCCGT TCACCCCCGA GGATTTCGCC GCGATCGAGA AAAAGATGCG CGAGATCATC GGCCGCGACA AGCCCTTCAC CAAGGAGGTG TGGGATCGCG AGAAGACCAA GCAGGTGTTC CGCGACAAGG GCGAGGCGTT CAAGGTCGAG CTGGTCGACG CCATTCCGGG CGACGAGCCG ATCAAGATCT ACTCCCAGGG CGACTGGTTC GATCTGTGCC GCGGCCCGCA CATGACCTCG ACGGGGAAGA TCGGCAACGC CTTCAAGCTG ATGAAGGTGG CGGGCGCGTA TTGGCGCGGC GATTCCAACA ATCCGATGCT GACCCGCATC TACGGCACCG CCTTCGCCAG GCAGGAGCAG CTCGACGCCT ACCTCAAGCA GATCGAGGAG GCGGAGAAGC GCGACCACCG CAAGCTCGGC CGCGAGCTCG ATCTGTTCCA TTTCCAGGAG GAAGGTCCGG GCGTCGTGTT CTGGCACCCC AAGGGCTGGA GCATCTTCCA GGCGCTGATC GCCTATATGC GGCGGCGCCT CGCCGGCGAG TATGACGAGG TGAATGCGCC GCAGATCCTC GACAAGTCGC TGTGGGAGAC CTCCGGTCAC TGGAACTGGT ACCGCGAGAA CATGTTCGCG GCGCAGTCCG CCGGCGACGA GGCCGAGGAC AAGCGCTGGT TTGCGCTGAA GCCGATGAAC TGCCCGGGTC ACGTGCAGAT CTTCAAGCAT GGGCTGAAGA GCTATCGCGA TCTGCCGCTG CGGCTCGCCG AATTCGGCGT CGTGCACCGC TACGAGGCCT CCGGCGCGAT GCACGGCTTG ATGCGCGTGC GCGGCTTCAC CCAGGACGAC GCGCACATCT TCTGCACCGA GGATCAGCTC GCCGAGGAAT GCCTGAAGAT CAACGATCTC ATTCTCTCGA CCTATTCCGA TTTCGGCTTC GAGGGCGAGT TGACGGTGAA GCTGTCGACC CGGCCGGAGA AGCGCGTCGG CACCGACGAG ATGTGGGATC ATGCCGAGCG CGTGATGGCC ACCGTGCTGA ACGAGATCAA GGCGCAGCGC AACAACATCC GCACCGAGAT CAACCCGGGC GAAGGCGCGT TCTACGGGCC GAAGTTCGAA TATGTGCTGC GCGACGCCAT CGGCCGCGAC TGGCAGTGCG GCACCACGCA GGTCGACTTC AACCTGCCCG AACGGTTCGG CGCCTTCTAC ATCGACGCCG ACGGCGCCAA GAAGGCGCCG GTCATGGTGC ATCGCGCGAT CTGCGGTTCG ATGGAGCGCT TCATCGGCAT CCTGATCGAG CACTATGCCG GCAGCTTCCC GCTGTGGCTG GCGCCGACCC AGGTCGTTGT CACCACCATC ACCTCGGAAG GCGACGAATA CGCCAAGCAG GTGCTGGCGG CGTTGCGCCG GGCGGGGCTG CGGGCGGAAA TCGATCTGCG CAACGAGAAG ATCAACTACA AGGTCCGCGA GCACTCGATG CAGAAGATCC CGGCTCTGCT CGTCGTCGGC AAGAAGGAGG CCGAGACGCA TTCGGTCTCC GTCCGCCGGC TCGGCCGCGA CGGCCAGACC GTGATGCCGA CGGCGGACGC GATCGCCGCC TTGGTCGACG AGGCGACGCC GCCGGACGTC CAGCGCCGCC AGCGCGAGGC GGCGTGA
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Protein sequence | MPDSKSPDSK SDHSKSGFQY SLSNLKPAAP VEKITIAFPD GAKREYPRGT TGLDIAKGIS PSLAKRTVAM ALNGDLADLN DPITEDAKLE LVDRDDPRAL ELIRHDCAHV LAEAVQSLWP GTQVTIGPVI ENGFYYDFFR NEPFTPEDFA AIEKKMREII GRDKPFTKEV WDREKTKQVF RDKGEAFKVE LVDAIPGDEP IKIYSQGDWF DLCRGPHMTS TGKIGNAFKL MKVAGAYWRG DSNNPMLTRI YGTAFARQEQ LDAYLKQIEE AEKRDHRKLG RELDLFHFQE EGPGVVFWHP KGWSIFQALI AYMRRRLAGE YDEVNAPQIL DKSLWETSGH WNWYRENMFA AQSAGDEAED KRWFALKPMN CPGHVQIFKH GLKSYRDLPL RLAEFGVVHR YEASGAMHGL MRVRGFTQDD AHIFCTEDQL AEECLKINDL ILSTYSDFGF EGELTVKLST RPEKRVGTDE MWDHAERVMA TVLNEIKAQR NNIRTEINPG EGAFYGPKFE YVLRDAIGRD WQCGTTQVDF NLPERFGAFY IDADGAKKAP VMVHRAICGS MERFIGILIE HYAGSFPLWL APTQVVVTTI TSEGDEYAKQ VLAALRRAGL RAEIDLRNEK INYKVREHSM QKIPALLVVG KKEAETHSVS VRRLGRDGQT VMPTADAIAA LVDEATPPDV QRRQREAA
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