Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5200 |
Symbol | |
ID | 5155002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5427570 |
End bp | 5428286 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640559973 |
Product | putative ABC transporter, ATP binding component |
Protein accession | YP_001241098 |
Protein GI | 148256513 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0864003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0646011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAGAGC GGCCTATACT TGCCGTCTTC GGCGTCTCGA AGACCTATCC GAGCAGGCAT GGTGCGCTGC CGGTTCTTCA GGACGTCTCT CTGGTGGTCT GCCGATCTGA ATTGTGCGCG ATCAAGGGGG CGTCCGGCTC CGGCAAGAGC ACCTTGATGA GCCTGATCGG GTTGCTGGAT CGACCGGACG CGGGTCGGAT CGAAATTACC GGCCTCAGGG TGGACCGCCT CGGTGCGGAC GAGCAGGCCA GGCTGCGCAA TCGGCTGATT GGCTTCGTCT TCCAATCGTT CAATTTGCTC CCGGGGCTTT CGGCGCTTGA AAATGTCGCG CTCCCCCTGC TGTACCGCGG CGTGTCACGA CCTGCGCGCC GGGACATTGC GAGATCCGCT CTGGCGCGGG TGGGTCTCCA AGACCGGATC GACCACCGCC CGAACCAGAT GTCTGGAGGG CAGTGCCAGC GCGTCGCCAT CGCGCGCGCG TTGGCAGGGC AACCGGCCGT CATTTTGGCC GATGAGCCGA CCGGGAGCCT CGATACAGCG ACATCCGAGA GCATCATGAA TCTGTTTCTC GATCTCAACA GGAATCACGG GACCACGATC ATTCTGGTGA CGCACGATCC GACGGTGGCC GCGCGCTGTC CGCGTCGAAT CGTCGTGAGT GACGGTCGCG TCGTCGACGA CAATCGCGAT GAGCTGCGCG ATGCAGGACC CTGTTGA
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Protein sequence | MIERPILAVF GVSKTYPSRH GALPVLQDVS LVVCRSELCA IKGASGSGKS TLMSLIGLLD RPDAGRIEIT GLRVDRLGAD EQARLRNRLI GFVFQSFNLL PGLSALENVA LPLLYRGVSR PARRDIARSA LARVGLQDRI DHRPNQMSGG QCQRVAIARA LAGQPAVILA DEPTGSLDTA TSESIMNLFL DLNRNHGTTI ILVTHDPTVA ARCPRRIVVS DGRVVDDNRD ELRDAGPC
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