| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5197 |
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| Symbol | |
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| ID | 5154999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5423435 |
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| End bp | 5424670 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640559970 |
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| Product | hypothetical protein |
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| Protein accession | YP_001241095 |
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| Protein GI | 148256510 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0742487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCG CTGCGCTGCT CATCCTGAGC GCCGCTGCCG CATGGCTGGG AGCGCCCTGG
GGCAACAAGG CTGGCAGCAC CGCGCCGCCA TCCCCGGCGC TGCGGTCGGT CCGGGTCTCG
GCCGGGACGG CGACCCGACA GCTCGTGGCC ATGGGCACCG TGGCGCCTGC GCGGAGCGTC
GCCGTTACGG CGCCCTATGA CGGTTCGATC GCTGAGAAGA AGGTCGCGCT CGGTGACACC
GTCGCCGAAC GGGACGTTCT GATTGTCATG AATGCGGAGG ACATCCAGAG CCGGGGGCGG
GAAGCCAGGT CGGCGACCTT GAAGGCTGCC ATTGCGCTCG ACGCGTTGAC GCATTGGGAG
GCCGGACCCG AGGTGACGCG CGCCAGGCGA GGCGTGGAGG CTGCCCGGAC CGTGCTCGCC
CGGCTCGAGC GCAAGGTAAA CGACACCAGG CAACTCTACG ACCGCGGGAT CGTCTCGCGG
GTCGAGTTCG AGGCGGCCGA GCAGGAGCGC GACAATCAAG CATTCACCGT CGCGACGGCG
GAGCAGGACC TGACCGCGAC CCTGGCGCGG GGCGGGGCCG ATTCCCGGCG TCTCGCCGAA
CTCGAGCTGG AAAATGCGAA GGCGAGATTG GCGGACGTTC AGCGTCAGGC GGACGGCACG
ATTGTCCGTG CGCCGGTTGC CGGCGTGATC GTGAAGCCGC CAACGGTCAA TGCGAGCGGA
GCGGTGCCGC AGACCGTCGA AACCGGCGCA CGCGTCCAGC GGGGCCAAAC GCTGTTCTCG
GTCGCCGACC TGTCGAGCCT GATCGTGGAC GGCAAGGTCG ACGAAATCGA CGTCAATCAA
ATCCGCATCG GCCAATCTGT CGCCATTTCC AGCGATGCAT TTCCGGGTCT TCCCCTGCGA
GGACATGTTG TGGGCGTCAG CTCCGAAGCA ACCCAGGACA GCGCCAATCA AACCGCGATG
TTCAACGTTC GTGTTCTGAT CGACGACACC AAGAAGGACG ACATCCGGAT CGGAATGTCC
GCGCGCATGA CCATCGAGCT GGATGCTCGG CCGGGAGCGC TGTTCGTTCC GATCGGGGCC
GTCCGGCGCG GCCCATCCGG CGCAACAACC GTGAAGCTGA TCGATTCGAC GTCAGGACAA
GCGCAGGAGC GTTCAGTTCG GCTCGGGGTG ACGACGCCGA CATCGGTGCA GATTCTCTCC
GGGCTGGAGG ACGGAGATGT CGTGGCGGTC GAGTGA
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| Protein sequence | MAGAALLILS AAAAWLGAPW GNKAGSTAPP SPALRSVRVS AGTATRQLVA MGTVAPARSV
AVTAPYDGSI AEKKVALGDT VAERDVLIVM NAEDIQSRGR EARSATLKAA IALDALTHWE
AGPEVTRARR GVEAARTVLA RLERKVNDTR QLYDRGIVSR VEFEAAEQER DNQAFTVATA
EQDLTATLAR GGADSRRLAE LELENAKARL ADVQRQADGT IVRAPVAGVI VKPPTVNASG
AVPQTVETGA RVQRGQTLFS VADLSSLIVD GKVDEIDVNQ IRIGQSVAIS SDAFPGLPLR
GHVVGVSSEA TQDSANQTAM FNVRVLIDDT KKDDIRIGMS ARMTIELDAR PGALFVPIGA
VRRGPSGATT VKLIDSTSGQ AQERSVRLGV TTPTSVQILS GLEDGDVVAV E
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