| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5196 |
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| Symbol | |
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| ID | 5152026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5422815 |
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| End bp | 5423420 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640559969 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_001241094 |
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| Protein GI | 148256509 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.282022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0648346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGA TTCTCACGAG AGCAGATGAG CCGCGCGTTC CCGCCTGGTT CGATCAAATG
TTTCGCGGCC GCGCCAAAGT GTTCCATGAA CGCCTCCGAT GGCGGGTGGT CGTCAGAGAC
GGCCGCGAAA TGGACCGCTA CGATGAGCAC GAGCGGACCA TCTATCTCAT GGCCATCGAC
AGCGCCGGAC AGGTGGTCGG CTCGTTGCGC CTGCTCCGCG CTGTCGGCGA AACGATGCTG
GACAACGAAT TCCGCGATTT CTTCTCACCT CCCATTGTCA TTCGGAGCGC GGAGATCCTG
GAATGCACCC GGTTTTGCGT TCACGGCGAC CAGACGTCAT CGAAGCCAAA TGCAGTCTCC
TCAGAGCTCA TGATCGGGCT CTGTGAATTC GCGCTTGCCA ACGGCATTCG CGAGGTCATC
GGGCTGTACA CCTCCGGGAT GACCCGCATT TATCGCCGTG TCGGCTGGGA GCCCCGTGAG
ATCGCCGTTG CCAAGCCGGA ATTCGGGCGT CTCATGCTGG GCACCTGGGC CGTATCGACA
GCCGCTCTGC AGACCATGAC ATTGCGAGCA GGCTCTTCTC GCGAACGGGC TCCCTCCGCG
CAATGA
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| Protein sequence | MIEILTRADE PRVPAWFDQM FRGRAKVFHE RLRWRVVVRD GREMDRYDEH ERTIYLMAID
SAGQVVGSLR LLRAVGETML DNEFRDFFSP PIVIRSAEIL ECTRFCVHGD QTSSKPNAVS
SELMIGLCEF ALANGIREVI GLYTSGMTRI YRRVGWEPRE IAVAKPEFGR LMLGTWAVST
AALQTMTLRA GSSRERAPSA Q
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