Gene BBta_5187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5187 
Symbol 
ID5153806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5415596 
End bp5415859 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content67% 
IMG OID640559961 
Producthypothetical protein 
Protein accessionYP_001241086 
Protein GI148256501 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.486528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGATCTGGC TGTATCGCCA CAGCCTGTCG CCGCTGGTCG GCTACAACTG CCGGCATCTG 
CCGACCTGTT CGGTCTATGC CGATCAGGCC ATCGAAGCGT ACGGACTATG GGCCGGCGGC
TGGATGACGC TCGCCCGTCT GTTGCGCTGC CAGCCGTTCG GCACCTCCGG CATCGACAAC
ATCCCGGCCG AAATCCCTCC CCGCGCCCGC TGGTACCTGC CCTGGCGCTA TGCGCGCTGG
CGCGGAGTCA ACGGGCCGAC CTGA
 
Protein sequence
MIWLYRHSLS PLVGYNCRHL PTCSVYADQA IEAYGLWAGG WMTLARLLRC QPFGTSGIDN 
IPAEIPPRAR WYLPWRYARW RGVNGPT