Gene BBta_5184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5184 
Symbol 
ID5153803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5413229 
End bp5413714 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content66% 
IMG OID640559958 
Producthypothetical protein 
Protein accessionYP_001241083 
Protein GI148256498 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.471729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.651552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACG ACATCTACAA TAAGCGGATC ATCGAACTTG CCGGCAATAT TCCGCGGCTC 
GGGCGGCTCG ACCACCCCGA TGCGACCGCA ACCGCCCATT CCAAGCTGTG CGGTTCGACC
GTCAAGGTCG ACCTCAAGAT GGACGGCCCG GTGGTGACCG ACTTCGCCCA TGACGTGAAG
GCCTGTGCCT TGGGCCAGGC CTCCTCCTCG ATCATGGCCC GCCACGTGGT CGGTTCCAAC
GCGGCCGAGC TGCGCGAATT GCGCGAGACC GTCCGCCGGA TGCTCAAGGA GAATGGCGCC
CCCCCGGAAG GCAAATGGGC CGATATCGCC CTGCTCGAGC CGGTGCGGGA CTATAAGGCG
CGCCACGCCT CGACCCTGCT GACGTTCGAC GCGGTCGTGG ATGCCATCAA CCAGATCGAA
GCCAAGGCCG GGGACAAGGC CCAGGACAGG ACGCAGAGCA CGGCGGCGGC GACAGCCCAG
GGCTGA
 
Protein sequence
MLNDIYNKRI IELAGNIPRL GRLDHPDATA TAHSKLCGST VKVDLKMDGP VVTDFAHDVK 
ACALGQASSS IMARHVVGSN AAELRELRET VRRMLKENGA PPEGKWADIA LLEPVRDYKA
RHASTLLTFD AVVDAINQIE AKAGDKAQDR TQSTAAATAQ G