Gene BBta_5180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5180 
Symbol 
ID5154285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5409080 
End bp5410255 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content69% 
IMG OID640559954 
Producthypothetical protein 
Protein accessionYP_001241079 
Protein GI148256494 
COG category[S] Function unknown 
COG ID[COG5330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.26956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.552151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC GGCAGTTTCT CAGTTGGGTC AGAACCGCGC CCGCCGGTGA GCGGGCAGAG 
GCCACCCGGG CTCTGGCCCG TGCGTGGTTG CTGTCGGATC TCTCTGATGA GGATCGGGGC
GCCGCCGAGG GCGCGCTCTT GATGCTCCTC GACGATCCGT CGCCGCTGGT GCGCCAGGCC
ATGGCGGAAG TGTTCGCCCG CTCGGCGGAT GCACCGGCCG CCATCGTTCA GGCGCTCGCC
ACCGACCAGC CGTCCGTCGC GGTCATCATC CTCGAACATT CGCCGCTGTT GATCGATGCC
GACCTCGTCG ACATCGTCGC GACCGGCAAT TCTGAAACCC AATGCGCGGT GGCGCGGCGC
ATCGGCCTGC CGGCGCCGGT CTGTGCCGCC ATCGCCGAAG TCGGCAGCGC GGCGGCCGCG
CTCGAGCTGA TCGAGAACGC CTATGCTGAA CTGCCGCCGT TCTCCTGGGA CCGCATCGTC
GAGCGCCACG GCCATCTCGC CGCGATCCGC GAAGCCATGC TGGTGCTGGA CGATTTGCCC
GCCGCGACCC GTGCGGCGCT GGTCGACAAG CTCTCCGAGA CTCTGGCGCA GTTCGTGGTC
GCCCGGAACT GGCTCAGCGC CGACCGGGCA GGGCGCATCA CCAGCGAGGC GCGCGACCGC
TCGACGATCA CGATTGCCGC GCGGTCGGGC GGCGAGGAGC TGCGTGGCCT CGTCCAGCAT
CTGCGGGCGA CGGCGCAACT GACCGCCGGC CTCATCCTGC GCGCGCTGCT GTCGGGCAAT
GTCGAATTGT TCGAGACCGC GCTGTCGGAG CTCGCCGACA TGCCGCGCGC GCGGGTGTCG
TCGCTGCTCA ACGATCGCGG CCGCGCCAGT TTGCAGGGGC TGTTGCGCAA GGCCGGGATT
CCCGACACCA CCTTCGAGGC CTTCGCCATC GCGCTGGATG TCTGCCGCGA GAATGGGTTT
GCCGATACGT TGAGCGGCGC GGCCATCCTG CGCCGCAAGA TGGTCGAACG CGTGCTGACG
CATTGCGCGA CCGACCGCGA CGCGGCCGAG CCGCTTCTGA TCCTGCTGCG CCGCTTCGCC
ACCGAATCCG CCCGCGACGA GGCCCGCGAA TTCTGCGACG AGGTGATCGC GGAGGATTTC
GTCGCCGGAC TGGAGTTCGG CCTGATCGCG GCCTGA
 
Protein sequence
MIVRQFLSWV RTAPAGERAE ATRALARAWL LSDLSDEDRG AAEGALLMLL DDPSPLVRQA 
MAEVFARSAD APAAIVQALA TDQPSVAVII LEHSPLLIDA DLVDIVATGN SETQCAVARR
IGLPAPVCAA IAEVGSAAAA LELIENAYAE LPPFSWDRIV ERHGHLAAIR EAMLVLDDLP
AATRAALVDK LSETLAQFVV ARNWLSADRA GRITSEARDR STITIAARSG GEELRGLVQH
LRATAQLTAG LILRALLSGN VELFETALSE LADMPRARVS SLLNDRGRAS LQGLLRKAGI
PDTTFEAFAI ALDVCRENGF ADTLSGAAIL RRKMVERVLT HCATDRDAAE PLLILLRRFA
TESARDEARE FCDEVIAEDF VAGLEFGLIA A