Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5180 |
Symbol | |
ID | 5154285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5409080 |
End bp | 5410255 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640559954 |
Product | hypothetical protein |
Protein accession | YP_001241079 |
Protein GI | 148256494 |
COG category | [S] Function unknown |
COG ID | [COG5330] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.26956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.552151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTTC GGCAGTTTCT CAGTTGGGTC AGAACCGCGC CCGCCGGTGA GCGGGCAGAG GCCACCCGGG CTCTGGCCCG TGCGTGGTTG CTGTCGGATC TCTCTGATGA GGATCGGGGC GCCGCCGAGG GCGCGCTCTT GATGCTCCTC GACGATCCGT CGCCGCTGGT GCGCCAGGCC ATGGCGGAAG TGTTCGCCCG CTCGGCGGAT GCACCGGCCG CCATCGTTCA GGCGCTCGCC ACCGACCAGC CGTCCGTCGC GGTCATCATC CTCGAACATT CGCCGCTGTT GATCGATGCC GACCTCGTCG ACATCGTCGC GACCGGCAAT TCTGAAACCC AATGCGCGGT GGCGCGGCGC ATCGGCCTGC CGGCGCCGGT CTGTGCCGCC ATCGCCGAAG TCGGCAGCGC GGCGGCCGCG CTCGAGCTGA TCGAGAACGC CTATGCTGAA CTGCCGCCGT TCTCCTGGGA CCGCATCGTC GAGCGCCACG GCCATCTCGC CGCGATCCGC GAAGCCATGC TGGTGCTGGA CGATTTGCCC GCCGCGACCC GTGCGGCGCT GGTCGACAAG CTCTCCGAGA CTCTGGCGCA GTTCGTGGTC GCCCGGAACT GGCTCAGCGC CGACCGGGCA GGGCGCATCA CCAGCGAGGC GCGCGACCGC TCGACGATCA CGATTGCCGC GCGGTCGGGC GGCGAGGAGC TGCGTGGCCT CGTCCAGCAT CTGCGGGCGA CGGCGCAACT GACCGCCGGC CTCATCCTGC GCGCGCTGCT GTCGGGCAAT GTCGAATTGT TCGAGACCGC GCTGTCGGAG CTCGCCGACA TGCCGCGCGC GCGGGTGTCG TCGCTGCTCA ACGATCGCGG CCGCGCCAGT TTGCAGGGGC TGTTGCGCAA GGCCGGGATT CCCGACACCA CCTTCGAGGC CTTCGCCATC GCGCTGGATG TCTGCCGCGA GAATGGGTTT GCCGATACGT TGAGCGGCGC GGCCATCCTG CGCCGCAAGA TGGTCGAACG CGTGCTGACG CATTGCGCGA CCGACCGCGA CGCGGCCGAG CCGCTTCTGA TCCTGCTGCG CCGCTTCGCC ACCGAATCCG CCCGCGACGA GGCCCGCGAA TTCTGCGACG AGGTGATCGC GGAGGATTTC GTCGCCGGAC TGGAGTTCGG CCTGATCGCG GCCTGA
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Protein sequence | MIVRQFLSWV RTAPAGERAE ATRALARAWL LSDLSDEDRG AAEGALLMLL DDPSPLVRQA MAEVFARSAD APAAIVQALA TDQPSVAVII LEHSPLLIDA DLVDIVATGN SETQCAVARR IGLPAPVCAA IAEVGSAAAA LELIENAYAE LPPFSWDRIV ERHGHLAAIR EAMLVLDDLP AATRAALVDK LSETLAQFVV ARNWLSADRA GRITSEARDR STITIAARSG GEELRGLVQH LRATAQLTAG LILRALLSGN VELFETALSE LADMPRARVS SLLNDRGRAS LQGLLRKAGI PDTTFEAFAI ALDVCRENGF ADTLSGAAIL RRKMVERVLT HCATDRDAAE PLLILLRRFA TESARDEARE FCDEVIAEDF VAGLEFGLIA A
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