Gene BBta_5172 details

Gene Information

• Locus tag: BBta_5172
• ID: 5153912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 5399348
• End bp: 5399893
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640559946
• Product: hypothetical protein
• Protein accession: YP_001241071
• Protein GI: 148256486

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.163802
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 0.262777
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAGT CTGCGATCAG GATCGCCACG CTGGCGCTGT TCTCGATGGC CGTGGCCTCC 
GGGCCGCTGC TTCTGTCTAA GGCCTATGCC GCGGGCAGCG ACACCCCGTC GTCGCCGCCG 
GCCTCGGATT CGTCCAAGAA GAAGAAGGAC AAGAGCTCGA GCATCGAAGA TCCGAAGTTC 
CTCGCAGCCT ATCGCACGGC CTACACCTCG ATCTATGACC GCGGCGACTA CGCCACCGCG 
ATCGAACAGC TCAAGGCGCT GAACCGTGAG GACGTCGCCG ACGTCGCCAA CCTCATTGGC 
TACTCCTACC GCAAGCTCGG CAACTACCAG GCCTCCAAGC AGTATTACGA GCAGGCGCTG 
GCGGATGATC CGAACCATGT GCGCACCTGG CAGTATTACG GCCTGTGGCA GCTCGAGCAG 
GGCAACCGCG AGCAGGCCAG GTACCACCTC GACAAGGTGG CGCAGCTCGC CGGTACCAAC 
AGCGCCGAAT ATCGCTCGCT GGCCGACGCG CTCGAGAAGC AGCCGGGCAC CGGCCTCGTC 
TACTAA 

 

Protein sequence

MKKSAIRIAT LALFSMAVAS GPLLLSKAYA AGSDTPSSPP ASDSSKKKKD KSSSIEDPKF 
LAAYRTAYTS IYDRGDYATA IEQLKALNRE DVADVANLIG YSYRKLGNYQ ASKQYYEQAL 
ADDPNHVRTW QYYGLWQLEQ GNREQARYHL DKVAQLAGTN SAEYRSLADA LEKQPGTGLV 
Y