Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5162 |
Symbol | |
ID | 5153768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5394311 |
End bp | 5394892 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640559938 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001241063 |
Protein GI | 148256478 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.186575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACC CGTCGCGCTC CGAGCGGTCG CGCAAGGCCG CGCTCACCGC CGCTCTCACC ATCATCGCTC GCGATGGGCC GGGGCGGCTG ACGCTCGACG CGATCGCGCG CGAGAGCGGG CTGAGCAAGG GGGGGCTGAT GCACCAGTTT CCCAACAAGG AGGCTGTGCT TAAGGCTCTG CTTGAACAGC AATTCGCGCA TTTCGACGAA TTCGCTCGCA AGTTCAGGGC TGAAGCAGGA CCAGCGACGA ACCAGCCTGA ACTGGCCACG CAGATCGCGA TTTCGCGCGA ACTGATCGCC CAGCAATATT CGGTGGCGCA GGCCATGCTG GGCGCGCTCG CTCAGGAGCC CGGTCTGCTC GCCGACGCCC GCGCCAAGGA TGGCGAGAGG GTGGCCGAGA TCCGCGGTGA GGCTCAAGAC GCCGATCTTG CCGTGCTCCG CTGGGCCGCG GCGCGGGGGC TGGCGTTGAT GGCGATGCTG CGCGTCTCGC CTCTGGAGCA GGTGGATCTC GACCGGCTGT TCGCGCGCCT GCTCGATGAC ACCCAATGGG CCGGATTCGC GCAGGCCGAT CGCCCGCGCT GA
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Protein sequence | MDNPSRSERS RKAALTAALT IIARDGPGRL TLDAIARESG LSKGGLMHQF PNKEAVLKAL LEQQFAHFDE FARKFRAEAG PATNQPELAT QIAISRELIA QQYSVAQAML GALAQEPGLL ADARAKDGER VAEIRGEAQD ADLAVLRWAA ARGLALMAML RVSPLEQVDL DRLFARLLDD TQWAGFAQAD RPR
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