Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5154 |
Symbol | |
ID | 5153653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5387375 |
End bp | 5388574 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640559929 |
Product | putative branched-chain amino acid ABC transport system substrate-binding protein |
Protein accession | YP_001241056 |
Protein GI | 148256471 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.210774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0422274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAC AGTGGATTCT CGCCGCGGCG CTGTCGCTCG TCGCCGGGCA GGTGGCCGTC GCCGCAGACA CGCCCGGCGT CACGGCGACA GAAATCAAGA TCGGCGGCGT ATTCCCCTTC AGCGGGCCGG CGTCGTCGCT TGGTCTCGTT GGTCGCGGGC TGATCGCCTA TATCCAGTCG CTCAACGATC GCGGCGGCAT TAATGGGCGC AAGATCAACT ACATCACGTA TGATGACGGC TACAGCCCGC CCAAGACGGT CGAGCACGTC CGCAAGCTGG TCGAGAGCGA CGAGGTCGCC TTCATGTATG GCCAGCTCGG GACGGCAGGA ATCTCGGCCA CGGCGAAGTA TCTGCGGACG AAGGGGGTGC CCAGCATCGC CATCATCAGC GGCTCGGCCA AGTTCACGAA TGTCTCGGAC TATCCGCTGA TCACCACCGG GCTCGTCAGC TACGACACGG AAGGAAAGAT CTACGCGAAG TACCTGACGA AGGCGCTGCC GAACGCCAAG TACGCCATTC TTTATCAGAA CGATGATCTT GGGAAAGACT ACGTCAACGC CTTCAAGTCC TATCTCGGCA AGAACTTCGA CAGCAAGGTC GTCAGCGCCT CCTACGAGGT CAGCGAGCCG ACCATCGATT CGCAAGTCAC CAACCTGAAG AGCTCGGGCG CTGAGGCGCT GGTGATCGCC GGCACGCCGA AATTCGCCGC GCAGGCGATC CGGCAGGCCT ATTTGATCGG CTGGAAGGCC ACGGTGATCG TCAACTTTCC CTCCGGATCG GTCGGCGGGA CGCTGGCGCC TGCTGGGCTC GACAAGTCGG TCGGCGTGAT CGTCGGCAGC ACCAACAAGG ACGCTCTCGA CGAGTCCTGG AAGAGCGATC CGGGCGTGCA GGCCTACCGG GCCTTTTTCG ACAAATATCT GCAGGGCGCG GACCTGTCCA ACGGCAGTTA TCTGACCGGC TATCAGCAGG GCCTGGTGCT GGAACAGATT CTCAAGCAAT GCGGCGACGA CCTGTCGCGC AAGAACATCC TCGCCCAGGC CAAGAGCCTG CGCGACTTCG TCGTGCCGAC GGCGCTTCCG GGAGTCAAGG TCAACACGAG CGAGACGGAG AACATGATCT GGACCCAGAT GCGTCTGCAA CGCTGGACCG GTTCGGCCTG GGAAGCCTTC GGCGACGTTC TGGACGCCAA GTCTGACTGA
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Protein sequence | MKTQWILAAA LSLVAGQVAV AADTPGVTAT EIKIGGVFPF SGPASSLGLV GRGLIAYIQS LNDRGGINGR KINYITYDDG YSPPKTVEHV RKLVESDEVA FMYGQLGTAG ISATAKYLRT KGVPSIAIIS GSAKFTNVSD YPLITTGLVS YDTEGKIYAK YLTKALPNAK YAILYQNDDL GKDYVNAFKS YLGKNFDSKV VSASYEVSEP TIDSQVTNLK SSGAEALVIA GTPKFAAQAI RQAYLIGWKA TVIVNFPSGS VGGTLAPAGL DKSVGVIVGS TNKDALDESW KSDPGVQAYR AFFDKYLQGA DLSNGSYLTG YQQGLVLEQI LKQCGDDLSR KNILAQAKSL RDFVVPTALP GVKVNTSETE NMIWTQMRLQ RWTGSAWEAF GDVLDAKSD
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